Caenorhabditis remanei (nematode): GCK72_007979
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Entry
GCK72_007979 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_007979
Enzymes [BR:
crq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
GCK72_007979
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GCK72_007979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
9810059
NCBI-ProteinID:
XP_053590769
UniProt:
A0A6A5HJG7
LinkDB
All DBs
Position
II:19108087..19113581
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AA seq
474 aa
AA seq
DB search
MKNALQESDPSPKKKKKVVAKKAQNGDGPAKKKVKKTKKVQEEEPVEEVEKLQLIDDDDE
EEGLDALNFTQHDGSDDDLRDDYSDDEDDDDLPIEKKSAALDKKKERILAEGEEELQLNI
ANQATFELPSVEEIENEMKSVPNLEIIKQRIADVIQVLGDFKNRRDPAKSRTQYVEVLKK
DLCSQYGYNDYLMGKFMDLFPNGAELLEFLEANDNPRPVTIRANSLKVKRRDLARNLINR
GMNVDPAADWTKVGLVVYDSQVPVGATPEYLAGHYMIQGLNSLLPVMALAPQPGDRVLDM
CSAPGGKTSHIAALMKNSGTLFANDASFDRCRAIIGNLHRLGVNNAVVCNLGGEEFAKIR
PNGFDRILLDAPCSGTGVIWKDQSVKTSKDSQDVQRRHTVQRQLILSALDSLDANSPNGG
YLVYSTCSVLVEENEAVVNFLLERRHCELVPTGLSIGVDGYTRFRDYRSIRRFQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgctcttcaagaatccgacccatctccgaagaaaaagaagaaggtggtggct
aaaaaagctcaaaatggtgatggaccggctaagaagaaggtgaaaaagacgaagaaagtg
caggaggaggagcctgtcgaagaggtcgagaaacttcaactgattgacgatgatgacgag
gaggaggggcttgatgcgctgaatttcactcagcatgatggaagtgacgacgatttgaga
gatgactactcagatgatgaagacgacgatgatctaccaatcgagaagaagtcggcggct
ctcgataagaaaaaggagagaattctggctgaaggagaagaagaattgcagttgaatatt
gcaaatcaagcgacattcgaattgccatcagtcgaagagatcgagaatgagatgaagtcg
gttccgaatctggaaattatcaaacaacgcattgccgacgtcattcaagttctcggagac
ttcaaaaatcgtcgtgatccggcgaaatcacgtactcaatatgttgaggtgttgaagaag
gatttgtgctctcaatacggttataatgactatttgatgggaaaattcatggatttgttc
ccgaatggagcagagttgttggagtttttggaggctaacgacaatccgagaccggtcacg
attcgtgccaattcgttgaaggttaaacgccgcgatctcgccagaaacctcatcaaccgt
ggaatgaacgtagacccggcggcggattggacgaaagttggactcgtcgtctacgattct
caagttccagtcggagcgacacccgaatatctcgccggacactatatgattcaaggactc
aactcattgctcccagtcatggcactggctccacaacccggagatcgtgtgctggatatg
tgctcggcgccaggaggaaagacgtcgcatatcgctgcgttgatgaagaatagtggaaca
ctgttcgccaatgatgccagtttcgatcgttgtcgtgccatcatcggaaaccttcatcgt
ctcggtgtgaacaacgcggtcgtctgtaatctcggcggagaggaattcgcaaaaatccgt
ccgaatggattcgatcgtatcttgttggatgctccatgctctggaactggagtcatttgg
aaggatcagtctgtgaagacgtcgaaagactcacaagacgttcagagacgtcatactgtc
cagagacagttgattctgtcggcactcgactcgttggacgcaaactcgcccaatggagga
tacctcgtctactcgacgtgctccgtccttgtcgaagagaacgaagcggtcgtgaatttc
cttctggaacgtcgtcactgtgaactcgtcccaaccggcctctcaatcggtgtcgacggc
tacactcgattccgtgattaccgttccatccgtcgctttcaatga
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