Caenorhabditis remanei (nematode): GCK72_008080
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Entry
GCK72_008080 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GCK72_008080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_008080
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GCK72_008080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D6
Nrap
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
9817482
NCBI-ProteinID:
XP_053590828
UniProt:
A0A6A5HJR3
LinkDB
All DBs
Position
II:19661953..19668072
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AA seq
1034 aa
AA seq
DB search
METPELSEDVLPMSNAFKLLCDDSTPKMNKKEVERHRQTAKKIKNDIESAKINLEIEYKN
LDFWTEHDIKHPLHHLQKAIDATSSSVTQFKWVKPSKITISDQVFVEMPSELLGNRDFLN
LTYPTKRAHFLCCIAKILSKNHAKIHFAAGGIHQDDPIFPDLIVDGIRIGIYCSDVAKPK
RFAPNIGNLRPATVFGEKLFKGVEIATPRFNQRMLWSVLELDLYQELEKTMKTHPTARLA
LHLLQSLLENRHLTHAFSKIVTTARVVRLIKNGEITEKQEILTVLRAIFKDFITWSLDDV
EHMDVDEEKLEDDVEKEYSQNFDVNLIWRHLNIASNITKNQMARMKKELATCYPLLGQVY
TFDPIFIEKFPVFAQYDHVSRLHVNVSQLLPILGEFGCDSVDNRDVISQFIKSLERKIQQ
TMSERYEFIGIHEITEDLKTTWQLTDYASQERQKTFLIGFRITSQWKNPLTVGPSAQTNE
AKEFRELWKGSSELRKFADTRICECVVWAEKPSEKVPRAVLQFVLQKMFDLPATCLSWRS
LTTTSTSAESDQQHEKKSQEAVFKAFTDLSTVLRGLKGIPLMITNVHGVSGYLRGTEPAY
PSVFAATSSNKSTDNHALPENGKIPLYSPAVTVHIKLEYSGKWGNDVEAIRRLTSSLYVK
IAEKLRTVHKLTAVPTIDQLFVLKSGIVFKIVVVNDRIMTILEEEVQKLKDSGATRIESS
IQGMRLAMWKKKFVAEPLLQMSLQSFSTSHKFFGSTVQLFKKWLGSKLLSGHLNDHVIEL
LVVAAISKRGSVEPQSTWSSFSRLLTLLCTHPWSSRPLVVDFGLKSWTEEERSKLEEKFI
KMRPILPPMVVIHEEDQLGSKFTRENPQGIVLNRLVAVAKEALKLMEKQTTGEKSIDLET
SLLTENLAPYDAIINLEPAAVVRKKALMERRPLPENSKFQHKIPVVELDPVDELVYQLNN
SFQSVAMFFYNKYGGHHIGVMFKPQEEEVPAKISRCALHKSISDSALRLNRAEILENILI
LGQGIVGDVELKKQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcccgaactatccgaagatgtgctcccgatgtcaaacgctttcaaattgctg
tgtgacgactctacgccaaaaatgaacaaaaaagaagttgaaagacatcgtcagacagcg
aaaaagatcaaaaatgatatagaatcggccaaaattaatctagaaatcgagtacaaaaac
ttggacttctggacagaacacgacatcaaacatcctctccatcatcttcagaaggctata
gatgccacgtcatcaagtgttactcagtttaaatgggtcaaaccttcaaaaatcacaatt
tcggatcaagttttcgtcgaaatgccatcagagctactaggaaatcgagactttctcaat
ttaacctatccaacaaaacgagctcatttcctctgctgtatcgcaaaaattctgtcgaaa
aaccacgcgaaaatccactttgcggctggtggaatccatcaggatgacccgattttcccg
gatttgattgtggatggaattcgaattggaatctattgttcggacgtggcaaaaccgaag
agattcgcaccgaatatcggaaatttgagaccggcgacagtgttcggagagaagttgttc
aaaggagtcgaaatcgccactccacgattcaatcaacgtatgctatggtcagttctagag
ttggatctgtatcaggagttggaaaagactatgaagactcatccaactgctcgtttggct
cttcatcttctccaatctctccttgaaaaccgtcatctcacccacgcattctccaaaatc
gtcacaactgcgcgtgtcgttcgtctcattaaaaatggagaaatcactgagaaacaggag
attctcactgttttgagagcgattttcaaagattttataacctggtcacttgatgatgtg
gaacacatggatgtcgatgaagaaaaactggaagatgatgtggaaaaggagtattctcag
aatttcgacgttaatctcatctggagacatttgaatattgcatcgaatatcacaaagaat
caaatggctagaatgaaaaaagagctcgccacgtgttatccgttgctcggacaagtctac
acattcgatccaatttttattgagaaattcccagtttttgcacaatatgaccatgtttcc
agactccacgtgaacgtctcccaacttcttccgattctcggtgaattcggatgtgactcc
gtggataatcgtgacgtcatcagtcaattcatcaaaagtttagagcgaaaaatccagcaa
accatgtcagagagatacgaattcatcggaattcatgaaattactgaagacttgaaaacc
acgtggcaactcactgactacgcgtcacaggaacgtcagaagacgtttttgattggattc
agaatcacttcgcaatggaagaatccgttgactgtcggaccatctgcacagactaatgag
gcgaaagaattccgtgaattatggaagggaagcagtgaacttcgcaagttcgccgacaca
cgtatctgcgaatgtgtcgtttgggcggagaaaccatcggaaaaggttccgcgggctgtt
ttgcaatttgtgctgcaaaaaatgttcgatctaccagccacatgtctctcgtggagatca
ctgacaactacatctacgtcagcagaaagtgatcagcaacacgagaagaagagccaagag
gctgtattcaaagcattcactgatttgagtactgtgttgagaggactcaaaggaattcct
ctaatgatcactaatgttcatggagttagtggttatttgagaggcactgagcccgcctat
ccatcagtcttcgctgccacgtcatcaaacaagtcaaccgacaatcacgctctcccagaa
aacggaaaaattccgttgtactctccggctgtcactgttcacatcaaattagaatattct
ggaaaatggggaaacgatgtggaggcaatcagacggttgacgtcttctctttatgttaag
atcgccgagaaactccgcacggtgcacaaactcaccgccgttccaacaatcgatcaatta
ttcgtattaaaatctggaattgtgttcaaaattgtcgttgtcaacgatcgaattatgacg
attttggaggaggaagttcagaaattgaaggattctggagccacgagaattgagagttca
attcagggaatgcgattggcgatgtggaagaaaaaattcgtcgctgaaccacttctccaa
atgtctcttcaatccttctcaacgagtcacaaattcttcggatccactgtacaattattc
aaaaaatggctgggttcgaaattgctatccggacacctcaatgatcatgtcatcgagcta
ttggtggtggctgcaatcagtaagagaggaagtgtcgagccgcaatccacgtggtcttcg
ttctcccgtctgctcactctcctctgcactcatccatggtcttcgcgcccactcgttgtc
gatttcggactgaaatcatggacagaagaagagagatcgaaactcgaagagaaattcata
aaaatgcgtccaattctcccgccgatggttgtcattcatgaggaagatcaactcggatcc
aaatttacacgtgaaaatccacagggaatcgttttgaatcgattagttgctgttgcaaag
gaggcgttgaaactcatggaaaaacagacgaccggagagaaatctatcgatttagagacc
tccctgctcactgaaaatctcgctccatacgacgcgatcatcaacttggaaccagcagcc
gtcgtcagaaagaaggctctcatggagagaagaccgttaccggaaaactcgaaattccaa
cacaaaattccagttgtcgagttggatccggttgatgaactcgtctatcagctcaataat
agtttccagtcggtcgccatgttcttctacaataaatacggtggtcatcatattggagtg
atgttcaaaccacaagaagaagaggttccggcaaagatatcccgttgcgctctccacaaa
tcgatatccgattcggcactccgtctgaaccgtgccgaaattctcgaaaatattctaatt
ttgggacaaggaattgtcggtgacgtggaattgaagaagcagtag
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