KEGG   Caenorhabditis remanei (nematode): GCK72_008080
Entry
GCK72_008080      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GCK72_008080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crq03009]
    GCK72_008080
Ribosome biogenesis [BR:crq03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    GCK72_008080
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap_D6 Nrap Nrap_D2
Other DBs
NCBI-GeneID: 9817482
NCBI-ProteinID: XP_053590828
UniProt: A0A6A5HJR3
LinkDB
Position
II:19661953..19668072
AA seq 1034 aa
METPELSEDVLPMSNAFKLLCDDSTPKMNKKEVERHRQTAKKIKNDIESAKINLEIEYKN
LDFWTEHDIKHPLHHLQKAIDATSSSVTQFKWVKPSKITISDQVFVEMPSELLGNRDFLN
LTYPTKRAHFLCCIAKILSKNHAKIHFAAGGIHQDDPIFPDLIVDGIRIGIYCSDVAKPK
RFAPNIGNLRPATVFGEKLFKGVEIATPRFNQRMLWSVLELDLYQELEKTMKTHPTARLA
LHLLQSLLENRHLTHAFSKIVTTARVVRLIKNGEITEKQEILTVLRAIFKDFITWSLDDV
EHMDVDEEKLEDDVEKEYSQNFDVNLIWRHLNIASNITKNQMARMKKELATCYPLLGQVY
TFDPIFIEKFPVFAQYDHVSRLHVNVSQLLPILGEFGCDSVDNRDVISQFIKSLERKIQQ
TMSERYEFIGIHEITEDLKTTWQLTDYASQERQKTFLIGFRITSQWKNPLTVGPSAQTNE
AKEFRELWKGSSELRKFADTRICECVVWAEKPSEKVPRAVLQFVLQKMFDLPATCLSWRS
LTTTSTSAESDQQHEKKSQEAVFKAFTDLSTVLRGLKGIPLMITNVHGVSGYLRGTEPAY
PSVFAATSSNKSTDNHALPENGKIPLYSPAVTVHIKLEYSGKWGNDVEAIRRLTSSLYVK
IAEKLRTVHKLTAVPTIDQLFVLKSGIVFKIVVVNDRIMTILEEEVQKLKDSGATRIESS
IQGMRLAMWKKKFVAEPLLQMSLQSFSTSHKFFGSTVQLFKKWLGSKLLSGHLNDHVIEL
LVVAAISKRGSVEPQSTWSSFSRLLTLLCTHPWSSRPLVVDFGLKSWTEEERSKLEEKFI
KMRPILPPMVVIHEEDQLGSKFTRENPQGIVLNRLVAVAKEALKLMEKQTTGEKSIDLET
SLLTENLAPYDAIINLEPAAVVRKKALMERRPLPENSKFQHKIPVVELDPVDELVYQLNN
SFQSVAMFFYNKYGGHHIGVMFKPQEEEVPAKISRCALHKSISDSALRLNRAEILENILI
LGQGIVGDVELKKQ
NT seq 3105 nt   +upstreamnt  +downstreamnt
atggagacgcccgaactatccgaagatgtgctcccgatgtcaaacgctttcaaattgctg
tgtgacgactctacgccaaaaatgaacaaaaaagaagttgaaagacatcgtcagacagcg
aaaaagatcaaaaatgatatagaatcggccaaaattaatctagaaatcgagtacaaaaac
ttggacttctggacagaacacgacatcaaacatcctctccatcatcttcagaaggctata
gatgccacgtcatcaagtgttactcagtttaaatgggtcaaaccttcaaaaatcacaatt
tcggatcaagttttcgtcgaaatgccatcagagctactaggaaatcgagactttctcaat
ttaacctatccaacaaaacgagctcatttcctctgctgtatcgcaaaaattctgtcgaaa
aaccacgcgaaaatccactttgcggctggtggaatccatcaggatgacccgattttcccg
gatttgattgtggatggaattcgaattggaatctattgttcggacgtggcaaaaccgaag
agattcgcaccgaatatcggaaatttgagaccggcgacagtgttcggagagaagttgttc
aaaggagtcgaaatcgccactccacgattcaatcaacgtatgctatggtcagttctagag
ttggatctgtatcaggagttggaaaagactatgaagactcatccaactgctcgtttggct
cttcatcttctccaatctctccttgaaaaccgtcatctcacccacgcattctccaaaatc
gtcacaactgcgcgtgtcgttcgtctcattaaaaatggagaaatcactgagaaacaggag
attctcactgttttgagagcgattttcaaagattttataacctggtcacttgatgatgtg
gaacacatggatgtcgatgaagaaaaactggaagatgatgtggaaaaggagtattctcag
aatttcgacgttaatctcatctggagacatttgaatattgcatcgaatatcacaaagaat
caaatggctagaatgaaaaaagagctcgccacgtgttatccgttgctcggacaagtctac
acattcgatccaatttttattgagaaattcccagtttttgcacaatatgaccatgtttcc
agactccacgtgaacgtctcccaacttcttccgattctcggtgaattcggatgtgactcc
gtggataatcgtgacgtcatcagtcaattcatcaaaagtttagagcgaaaaatccagcaa
accatgtcagagagatacgaattcatcggaattcatgaaattactgaagacttgaaaacc
acgtggcaactcactgactacgcgtcacaggaacgtcagaagacgtttttgattggattc
agaatcacttcgcaatggaagaatccgttgactgtcggaccatctgcacagactaatgag
gcgaaagaattccgtgaattatggaagggaagcagtgaacttcgcaagttcgccgacaca
cgtatctgcgaatgtgtcgtttgggcggagaaaccatcggaaaaggttccgcgggctgtt
ttgcaatttgtgctgcaaaaaatgttcgatctaccagccacatgtctctcgtggagatca
ctgacaactacatctacgtcagcagaaagtgatcagcaacacgagaagaagagccaagag
gctgtattcaaagcattcactgatttgagtactgtgttgagaggactcaaaggaattcct
ctaatgatcactaatgttcatggagttagtggttatttgagaggcactgagcccgcctat
ccatcagtcttcgctgccacgtcatcaaacaagtcaaccgacaatcacgctctcccagaa
aacggaaaaattccgttgtactctccggctgtcactgttcacatcaaattagaatattct
ggaaaatggggaaacgatgtggaggcaatcagacggttgacgtcttctctttatgttaag
atcgccgagaaactccgcacggtgcacaaactcaccgccgttccaacaatcgatcaatta
ttcgtattaaaatctggaattgtgttcaaaattgtcgttgtcaacgatcgaattatgacg
attttggaggaggaagttcagaaattgaaggattctggagccacgagaattgagagttca
attcagggaatgcgattggcgatgtggaagaaaaaattcgtcgctgaaccacttctccaa
atgtctcttcaatccttctcaacgagtcacaaattcttcggatccactgtacaattattc
aaaaaatggctgggttcgaaattgctatccggacacctcaatgatcatgtcatcgagcta
ttggtggtggctgcaatcagtaagagaggaagtgtcgagccgcaatccacgtggtcttcg
ttctcccgtctgctcactctcctctgcactcatccatggtcttcgcgcccactcgttgtc
gatttcggactgaaatcatggacagaagaagagagatcgaaactcgaagagaaattcata
aaaatgcgtccaattctcccgccgatggttgtcattcatgaggaagatcaactcggatcc
aaatttacacgtgaaaatccacagggaatcgttttgaatcgattagttgctgttgcaaag
gaggcgttgaaactcatggaaaaacagacgaccggagagaaatctatcgatttagagacc
tccctgctcactgaaaatctcgctccatacgacgcgatcatcaacttggaaccagcagcc
gtcgtcagaaagaaggctctcatggagagaagaccgttaccggaaaactcgaaattccaa
cacaaaattccagttgtcgagttggatccggttgatgaactcgtctatcagctcaataat
agtttccagtcggtcgccatgttcttctacaataaatacggtggtcatcatattggagtg
atgttcaaaccacaagaagaagaggttccggcaaagatatcccgttgcgctctccacaaa
tcgatatccgattcggcactccgtctgaaccgtgccgaaattctcgaaaatattctaatt
ttgggacaaggaattgtcggtgacgtggaattgaagaagcagtag

DBGET integrated database retrieval system