Caenorhabditis remanei (nematode): GCK72_008222
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Entry
GCK72_008222 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03030
DNA replication
crq03410
Base excision repair
crq03420
Nucleotide excision repair
crq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCK72_008222
03410 Base excision repair
GCK72_008222
03420 Nucleotide excision repair
GCK72_008222
03430 Mismatch repair
GCK72_008222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crq03032
]
GCK72_008222
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_008222
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_008222
DNA replication proteins [BR:
crq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GCK72_008222
DNA Replication Termination Factors
ELG1-RFC complex
GCK72_008222
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GCK72_008222
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GCK72_008222
Check point factors
HRAD17(Rad24)-RFC complex
GCK72_008222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_24
AAA_22
AAA_30
RCF1-5-like_lid
AAA_5
AAA_11
AAA_assoc_2
AAA_16
AAA_14
AAA_19
AAA_2
SLFN-g3_helicase
DUF815
DEAD
ResIII
AAA_7
Mg_chelatase
PhoH
TniB
AAA_28
ATPase_2
AAA_25
Thioredoxin_6
ABC_tran
nSTAND3
AAA_18
Motif
Other DBs
NCBI-GeneID:
9814145
NCBI-ProteinID:
XP_003102180
UniProt:
A0A6A5GY02
E3MP05
LinkDB
All DBs
Position
III:331008..333004
Genome browser
AA seq
350 aa
AA seq
DB search
MVSTPAVVSNLPWVEKYRPSKLDELVAHEQVVKTLTKFIENRTLPHLLFYGPPGTGKTTT
VLAAARKMYSPARMSSMVLELNASDERGIDVVRNTIVNFAQTKGLQSYATASSSDQVPFK
MVILDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIIPAIQSRCTRFRFAPLDQK
LIVPRLDFIVNSENIKMTSDGRQALLTVSNGDMRTVINTLQSTAMSFDTVSESTVYQCIG
QPTPKEMKQVVSILLNDSAKTCMNLIKTKLFDNGYALQDVITHLHDWAFTLDIPDEAMSA
IVTGLGEVEQNLASGCSNETQLAAVVAAFFEAKGLCTKEMNQTGVEAMEH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggtttccacaccagctgtcgtctcaaatttgccatgggtggagaaatatcggccgagc
aaactcgatgagctcgtcgcacacgaacaagttgtgaaaactctgacaaaattcatcgaa
aatcggactctgccgcatcttttgttctatggaccgccgggaaccggaaaaacgacgacg
gtgttggcggcggcgcgtaaaatgtactcgccagcgaggatgtcgtcgatggtgttggaa
ttgaacgcttctgatgagcgtggtattgatgttgtcaggaatacaatcgtcaatttcgca
caaaccaagggactccaatcgtatgcgaccgcgtcgagcagcgatcaagtgccatttaaa
atggtgattcttgatgaggctgatgcgatgacaaaggatgcgcagaatgcgttgagaaga
gttatcgaaaagtacacggacaacgtgcgtttctgcatcatctgcaactacttggcctcc
atcatccccgccattcaatcccgttgtactcgcttccgtttcgcgccgctcgatcagaaa
ctcatcgttcctcgtctcgatttcatcgtcaattctgaaaatatcaagatgacgtcagac
gggcggcaagcacttcttactgtatcgaacggtgacatgcgtacagtaatcaacacgttg
caatcgacggcgatgagtttcgatacagtatccgagagtacggtatatcaatgcatcgga
cagccgacaccgaaagaaatgaagcaagttgtgagcattctgttgaacgattccgccaaa
acgtgcatgaatttgatcaaaacgaaactgttcgataatggatacgcactgcaagatgtg
atcactcatcttcacgattgggcgttcactttggatattcctgatgaagcgatgtctgca
attgtcacaggattgggagaggttgagcagaatctggcgagtggatgctccaatgagaca
caactcgctgctgtcgtcgccgcgttttttgaggcgaaaggattgtgtacgaaggagatg
aatcagactggagtggaggcgatggagcattaa
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