Caenorhabditis remanei (nematode): GCK72_008299
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Entry
GCK72_008299 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00512
Mucin type O-glycan biosynthesis
crq00514
Other types of O-glycan biosynthesis
crq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
GCK72_008299
00514 Other types of O-glycan biosynthesis
GCK72_008299
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crq01003
]
GCK72_008299
Enzymes [BR:
crq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
GCK72_008299
Glycosyltransferases [BR:
crq01003
]
O-Glycan biosynthesis
Mucin-type
GCK72_008299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
RicinB_lectin_2
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
9809626
NCBI-ProteinID:
XP_053586333
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Position
III:681838..698006
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AA seq
708 aa
AA seq
DB search
MGCSVLSLLYCVNVMDAWQYVESVEYYWTAATDKRNTGDTGQFCRTKMLIFKKKAILKVL
LLVPVIWICSLIFFAATSTNSNQIGSNNELADRINQANFHPKEVPKHQKPDVIQGFGPPI
EPEPVVAENKIEDEPAGGNLKKPVFMVDPNDPIYKKGDANQAGELGKAVVVDKTKLTSEQ
KAIYDKGMLNNAFNQYASDMISVHRTLPTNIDAECKVEKYNENLPRTSVIVCFHNEAWSV
LLRTVHSVLERTPEHLLEEIVLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIR
ARLRGAAIATGEVLTYLDSHCECMEGWIEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHS
KAYFTSVGGFDWGLQFNWHSIPERDRKNRTRAIDPVRSPTMAGGLFSIDKKYFEKLGTYD
PGFDIWGGENLELSFKIWMCGGTLEIVPCSHVGHVFRKRSPYKWRTGVNVLKRNSIRLAE
VWLDDYKTYYYERINNQLGDFGDVSARKKLRSDLGCKSFKWYLDNIYPELFVPGESVAKG
ELRNAQTSQCLDSAVGDEVENKAITPYPCHEQGGNQIRSAGGGNRQCIDYNTSNKKSFGM
YQCHSQGGNQYWMLSKDGEIRRDESCVDYAGTDVMVFPCHGMKGNQEWRYNHDTGRLQHA
VSQKCLGMTKDGAKLEMVACQYDDPYQHWKFKEFNEAKAIEHGVKPPS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggggtgttctgttctttccctattgtattgtgtgaatgttatggacgcgtggcaatat
gtggagtcggttgaatactactggacggcggcgacggataaacggaacactggcgatacg
ggtcaattttgccgcacaaaaatgctaatattcaagaaaaaggcgatattaaaagtgctc
ctcttggtgccagtcatttggatttgttcgctgatattctttgcggcaacgagtactaat
agtaatcagatcggatccaataatgagctggcggatcggataaatcaagcgaatttccat
ccgaaagaggttccaaaacatcaaaaaccggatgtaattcaaggattcggtcctccgatc
gaaccggaacccgttgtcgccgagaataagattgaagacgagccggcgggtgggaatttg
aagaaacccgtgttcatggtcgatccgaatgatccgatttataaaaaaggggatgcgaat
caggcgggagagttgggaaaagctgtggttgtagataagacgaagctcacctccgaacaa
aaggcgatctacgacaaaggaatgttgaataacgcattcaatcaatacgcgtcggatatg
atctcagtacatcgcacacttccaaccaatatcgatgctgaatgcaaagtggagaaatac
aacgagaatcttccccgaacctctgtgatcgtctgtttccacaacgaagcgtggtccgtt
ctcctccgtaccgtccactcggttctcgaacggactcccgagcatttgctcgaagaaatt
gtgctcgtcgacgacttttcggatatggatcacacgaaacggccactcgaggagtatatg
tcacaatttggtggaaaagtgaaaatattgagaatggagaagagagagggattgattcgg
gcgaggttacgaggtgccgccatcgctaccggcgaggttctcacgtatttagattcacat
tgtgaatgtatggaaggatggatcgagccacttctcgaccgtatcaaacgtgacccaact
acagtagtctgcccagtcattgacgtcatcgatgacaacacgttcgaatatcaccactcg
aaagcctacttcacaagtgtcggtggattcgattggggtcttcaattcaactggcactcg
atccccgaaagagaccgaaagaatcgaacacgagctatcgatccggtgagatcaccgacg
atggccggtggtctgttctcgattgataagaagtatttcgagaaattgggaacctatgat
ccaggattcgatatttggggtggagagaacttggaattgtcgtttaagatctggatgtgc
ggtggcacgcttgaaatcgtaccgtgctctcacgtcggtcacgtcttccgcaaacgatca
ccgtacaaatggaggaccggagtcaatgttctcaagagaaattcgattcgattggcagaa
gtttggctggatgactataagacatattattatgagaggattaacaatcagttgggtgac
ttcggagacgtgtcggcccgtaaaaaactgcgttctgaccttggctgtaaatcattcaaa
tggtacttggacaacatctatccggaactctttgttcctggagagtcggtggctaaagga
gagctgcgaaacgcgcaaacctcacaatgtttggatagtgccgtcggcgatgaagtggag
aacaaggcgatcacaccgtatccgtgtcatgagcaaggaggcaatcagattcgaagcgcc
ggtggcggcaatcgtcaatgcatcgactacaatacgagcaacaaaaagtcgtttggcatg
tatcaatgtcatagtcagggtggaaatcagtactggatgttatcgaaagacggcgaaatt
cgacgagacgaatcgtgtgtcgactatgctggaactgatgtgatggtattcccgtgtcac
ggaatgaagggaaatcaagagtggagatataatcatgatacgggtcgcctccaacacgcc
gtctcgcaaaagtgtctcggaatgacaaaagacggagcgaagctggaaatggtggcatgt
caatacgatgatccttatcaacactggaaattcaaagagttcaatgaagcgaaggcgatc
gagcatggcgtgaagccgcctagttaa
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