Caenorhabditis remanei (nematode): GCK72_008325
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Entry
GCK72_008325 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03030
DNA replication
crq03410
Base excision repair
crq03420
Nucleotide excision repair
crq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCK72_008325
03410 Base excision repair
GCK72_008325
03420 Nucleotide excision repair
GCK72_008325
03430 Mismatch repair
GCK72_008325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crq03032
]
GCK72_008325
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_008325
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_008325
DNA replication proteins [BR:
crq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GCK72_008325
DNA Replication Termination Factors
ELG1-RFC complex
GCK72_008325
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GCK72_008325
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GCK72_008325
Check point factors
HRAD17(Rad24)-RFC complex
GCK72_008325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_16
AAA_14
AAA_22
Rad17
RuvB_N
AAA_assoc_2
Mg_chelatase
RCF1-5-like_lid
nSTAND3
NTPase_1
RNA_helicase
Viral_helicase1
AAA_28
AAA_5
AAA_24
AAA_19
AAA_18
AAA_11
AAA_33
AAA_3
DNAX_ATPase_lid
IstB_IS21
MeaB
AAA_30
AAA_25
MipZ
AAA_2
ABC_tran
TsaE
DUF815
Motif
Other DBs
NCBI-GeneID:
9809444
NCBI-ProteinID:
XP_003104887
UniProt:
E3MFV2
LinkDB
All DBs
Position
III:852795..856232
Genome browser
AA seq
329 aa
AA seq
DB search
MSKHQKHELAPWVEKYRPQVLSDIVGNENMVSRLEVIAKEGNVPNIILSGPPGIGKTTSV
WALARELLGDKVKEAVLELNASDERGIDVVRNRIKTFAQTKVTLPEGRHKIIILDEADSM
TDGAQQALRRTMELYSKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVELLYRVKEVA
KAESVNYDDGGLEAILFTAQGDMRQALNNLQATVNAYERVNKENVLKVCDEPHPDLMIKM
LLYCTEKKFFEAAKIIHEFHRLGFSSDDILSTLFRVVKTVELSKNVSEQLRMQYIKEIGV
CHMRVVQGLTSKLQLSRLVADLCRVSVDA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaccaaaaacacgaattagcgccctgggttgagaaatatcgtccacaagtc
ctctcggacattgtcggcaacgaaaatatggttagccgactggaagtgatcgccaaagaa
ggaaatgttccgaatatcattctatcgggaccgccgggaatcggaaaaacgacgtcggtg
tgggcgctggcgagagaattgttgggtgataaggtgaaggaggcggtgctcgagttgaac
gcttctgatgagagaggaatcgacgtcgtcagaaatcgcatcaaaacgttcgctcagacg
aaagttacacttccagagggtcgacacaaaattattattctcgatgaggccgattcgatg
acggacggtgctcagcaggctctccggcgtactatggaactgtattcgaagacgactcgc
ttcgcgttggcttgtaatcaatcggagaagattattgaaccaattcaatcgcgttgcgcc
cttctccgctacacgaagctctccccagtggagcttctctatcgagtcaaagaagtggcg
aaggcggagagcgtgaactacgacgacggtggtctcgaagcgattctattcacagcacaa
ggcgatatgagacaagcgttgaataaccttcaggcgacagtgaatgcatacgaacgagtg
aataaggagaacgtgttgaaagtttgcgatgagccacatccggatctcatgattaagatg
ttgttgtactgtacggagaaaaaattcttcgaggcggcgaaaattattcacgaatttcat
cgattgggattctcgtcagatgatattctgtccactttgtttcgcgttgtcaagacggtc
gagttgtcgaaaaatgtctctgagcagttgagaatgcagtatattaaggaaatcggcgtg
tgtcacatgcgagtcgtgcaaggactcacatcgaaacttcagctctcgcgcctcgtcgcc
gatttgtgtcgtgtttcagtcgatgcttga
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