KEGG   Caenorhabditis remanei (nematode): GCK72_008507
Entry
GCK72_008507      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14848  ribosome assembly protein RRB1
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crq03009]
    GCK72_008507
Ribosome biogenesis [BR:crq03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    GCK72_008507
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_RIG_2nd WD40_WDHD1_1st CAF1C_H4-bd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_EML EIF3I Beta-prop_SCAP Beta-prop_TEP1_C MIOS_WD40 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st eIF2A Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_RIG_1st WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 9817171
NCBI-ProteinID: XP_003098995
UniProt: E3MXY0 A0A6A5GZX5
LinkDB
Position
III:complement(1784461..1787386)
AA seq 520 aa
MNNDGGTGGIVGSLPRAGLMNGDATSGTYGGGARRGCGATGGFETGGADDSEDVGPADIK
MSGENDVEMHEEEPVEEVDDSDDSEESEDDDDVDTGDEDEETPENQRQAYIPGLSRPLKK
GEELDFDPSAYKVFHSFNSDWPCLSFDVVKDGLGDNRTQFPAECYIVSGTQADKPRDNEI
IVMGLKNLSTMRKQKENKGDDSDTSEDESDDEDEEQSKKREPKMHAVSIPHYGGINRIRA
DRLGDSTVCACWSDQGRVQVWNITDALNYSHGMSGESKTEVQKIDRPLFTNNGSGKEGYG
LAWSPLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLTS
CSADGSIKLWDTRATPKDACVYTVQKAHESDVNVISWNRHENLIVSGGDDGELKIWSLKT
IQYGQPVAVFKYHNGPITSVEWHPDETTTFMASGEDDQTTIWDIATEADGQTNIEGVPPQ
LMFVHMGQKEVKEVHWHPQIPGLAVNTSIDGFNVFKTINI
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgaacaacgatggtggaactggcggcattgttggaagtctcccaagagctggattaatg
aatggagacgccactagtggtacatatggaggaggtgctagaagaggttgtggagcaact
ggaggatttgaaacgggcggagctgacgattcagaagacgtcgggccagccgatatcaaa
atgtccggtgaaaacgacgtagaaatgcatgaagaggagccggtggaggaggtagacgac
tccgacgattctgaggaatctgaagacgatgacgacgttgatactggagatgaggacgaa
gaaacaccagagaatcagagacaagcctacattccaggactcagtcgaccgctgaagaag
ggagaagagttggatttcgatccaagcgcctacaaagtttttcatagctttaactcagat
tggccatgcttgtcatttgatgttgtgaaagacggactcggtgataatcgcactcaattc
cctgccgaatgctatattgtcagcggtactcaagcggataagccgagagataatgagatt
attgtgatgggactaaagaatctgtctacgatgagaaagcaaaaagagaacaaaggcgac
gacagcgacacttctgaagacgaatctgatgacgaggacgaggagcagtcgaaaaaacgg
gaaccgaaaatgcatgccgtctcaattccacactacggaggcatcaatcgaattcgcgct
gaccgcctcggtgatagtaccgtctgcgcgtgttggagtgatcagggacgtgttcaggtg
tggaatatcacagatgcactcaactattcgcatggaatgagtggagagtcgaagactgaa
gtgcagaagatcgatagaccacttttcacgaataacggatctggaaaagagggatacgga
ctcgcgtggtcgccgttgaagactggagatctcgctactggagatatcatcaagaaaatc
tacttgtggcagatgaaagagggaggacagtgggctgttggagccaatccgttgactgga
cacaaaaaaagtgtcgaagacctcgcctggtcgcccactgaaaccggacttctcacctcg
tgctccgctgacggaagcatcaaactatgggatactcgtgccacgccaaaagacgcctgc
gtctataccgttcagaaggcccatgaatccgatgtgaacgtcatctcatggaatcgtcac
gagaatctgattgtttctggtggagacgatggagagttgaagatttggtcactgaaaact
attcaatacggacaaccggtcgccgtgttcaaatatcataatggaccgatcacatcagtc
gaatggcatccagatgagacgacgacgttcatggcttcaggagaggacgatcaaacgacg
atttgggatattgcaacggaagcggacggacaaacgaatatcgaaggagttccaccacaa
cttatgttcgttcatatgggacaaaaggaggtgaaagaagtgcattggcatccacaaatc
cctggattggctgtcaatacatcgatcgatggattcaatgtcttcaagactatcaatatt
taa

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