Caenorhabditis remanei (nematode): GCK72_008507
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Entry
GCK72_008507 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_008507
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GCK72_008507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
EIF3I
Beta-prop_SCAP
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
eIF2A
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_RIG_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
9817171
NCBI-ProteinID:
XP_003098995
UniProt:
E3MXY0
A0A6A5GZX5
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All DBs
Position
III:complement(1784461..1787386)
Genome browser
AA seq
520 aa
AA seq
DB search
MNNDGGTGGIVGSLPRAGLMNGDATSGTYGGGARRGCGATGGFETGGADDSEDVGPADIK
MSGENDVEMHEEEPVEEVDDSDDSEESEDDDDVDTGDEDEETPENQRQAYIPGLSRPLKK
GEELDFDPSAYKVFHSFNSDWPCLSFDVVKDGLGDNRTQFPAECYIVSGTQADKPRDNEI
IVMGLKNLSTMRKQKENKGDDSDTSEDESDDEDEEQSKKREPKMHAVSIPHYGGINRIRA
DRLGDSTVCACWSDQGRVQVWNITDALNYSHGMSGESKTEVQKIDRPLFTNNGSGKEGYG
LAWSPLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLTS
CSADGSIKLWDTRATPKDACVYTVQKAHESDVNVISWNRHENLIVSGGDDGELKIWSLKT
IQYGQPVAVFKYHNGPITSVEWHPDETTTFMASGEDDQTTIWDIATEADGQTNIEGVPPQ
LMFVHMGQKEVKEVHWHPQIPGLAVNTSIDGFNVFKTINI
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgatggtggaactggcggcattgttggaagtctcccaagagctggattaatg
aatggagacgccactagtggtacatatggaggaggtgctagaagaggttgtggagcaact
ggaggatttgaaacgggcggagctgacgattcagaagacgtcgggccagccgatatcaaa
atgtccggtgaaaacgacgtagaaatgcatgaagaggagccggtggaggaggtagacgac
tccgacgattctgaggaatctgaagacgatgacgacgttgatactggagatgaggacgaa
gaaacaccagagaatcagagacaagcctacattccaggactcagtcgaccgctgaagaag
ggagaagagttggatttcgatccaagcgcctacaaagtttttcatagctttaactcagat
tggccatgcttgtcatttgatgttgtgaaagacggactcggtgataatcgcactcaattc
cctgccgaatgctatattgtcagcggtactcaagcggataagccgagagataatgagatt
attgtgatgggactaaagaatctgtctacgatgagaaagcaaaaagagaacaaaggcgac
gacagcgacacttctgaagacgaatctgatgacgaggacgaggagcagtcgaaaaaacgg
gaaccgaaaatgcatgccgtctcaattccacactacggaggcatcaatcgaattcgcgct
gaccgcctcggtgatagtaccgtctgcgcgtgttggagtgatcagggacgtgttcaggtg
tggaatatcacagatgcactcaactattcgcatggaatgagtggagagtcgaagactgaa
gtgcagaagatcgatagaccacttttcacgaataacggatctggaaaagagggatacgga
ctcgcgtggtcgccgttgaagactggagatctcgctactggagatatcatcaagaaaatc
tacttgtggcagatgaaagagggaggacagtgggctgttggagccaatccgttgactgga
cacaaaaaaagtgtcgaagacctcgcctggtcgcccactgaaaccggacttctcacctcg
tgctccgctgacggaagcatcaaactatgggatactcgtgccacgccaaaagacgcctgc
gtctataccgttcagaaggcccatgaatccgatgtgaacgtcatctcatggaatcgtcac
gagaatctgattgtttctggtggagacgatggagagttgaagatttggtcactgaaaact
attcaatacggacaaccggtcgccgtgttcaaatatcataatggaccgatcacatcagtc
gaatggcatccagatgagacgacgacgttcatggcttcaggagaggacgatcaaacgacg
atttgggatattgcaacggaagcggacggacaaacgaatatcgaaggagttccaccacaa
cttatgttcgttcatatgggacaaaaggaggtgaaagaagtgcattggcatccacaaatc
cctggattggctgtcaatacatcgatcgatggattcaatgtcttcaagactatcaatatt
taa
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