KEGG   Caenorhabditis remanei (nematode): GCK72_008598
Entry
GCK72_008598      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K20182  vacuolar protein sorting-associated protein 33A
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04140  Autophagy - animal
crq04142  Lysosome biogenesis
crq04145  Phagocytosis
crq04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:crq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    GCK72_008598
   04142 Lysosome biogenesis
    GCK72_008598
   04140 Autophagy - animal
    GCK72_008598
   04148 Efferocytosis
    GCK72_008598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_008598
Membrane trafficking [BR:crq04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    GCK72_008598
   Hops complex
    GCK72_008598
SSDB
Motif
Pfam: Sec1 zf-CCCH_6
Other DBs
NCBI-GeneID: 9806138
NCBI-ProteinID: XP_053586485
LinkDB
Position
III:complement(<2234763..>2246539)
AA seq 535 aa
MAAGSDDRDDAAAILNWEGTNEIKSANEYSRNLLFSILDSLDGNKTIVWDRDRSVMHRVN
LFAGASVLAAHGVVANHSIETKKIATTPHVVFFLAPTMVSLDLLCDYIDNVRNDTKILYQ
VFFIPEAWYVVRESLKLRNEGKYWERLESVKEIPLCWLPRDGECLSLSSPQIASRLLING
DWTHLHKCAVALNQLVDMCRGRSPSTHQRPMSIYSKGKWATDVARMMKKVRSSTEADHLL
KNADPIEGLLKINRIVLIDRWLDPLTPMLSQLTFFGLLDEIYGIGMVNSVKVPETEFTNQ
GDKDGNPFDEKIEKEVHLRDEVYHRLKHSHINAISNEASKVLAEIRDDEQFDREKMSVAE
YSVLVKKMPKILNRKKMIEVHMRLAEMIQGHVYCKLSDSIKMERDWISEMLQFQLTRPLK
ISSISGLVFSLRVGDPLDLSSFEVLDGNSPGLSNWKGFANNRHYIDLDGVTEGYNSKLTR
PLEISSISRLMLPFRVGDPLDLSSFEVLDGDSPGLSWKGFANSRHYIELDGITDV
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggcagcaggtagtgatgaccgagacgatgcggctgcaattctcaattgggagggaaca
aacgagatcaaaagtgccaacgaatacagcagaaatcttctcttctcgattctcgactca
ctggatggtaacaagacgatagtttgggatagggatcggagtgttatgcatagagttaat
ttgttcgccggtgcgtctgtgctcgccgctcacggagtggtcgcaaatcactcaatcgag
acgaaaaagattgccacaacgcctcatgtcgtcttcttcttggcgccaacgatggtttcc
ctggatttattgtgtgattatatcgataatgtgcgaaatgatacgaaaatcctgtaccaa
gtgttctttatcccagaagcgtggtacgttgttcgagagagtttgaagttgagaaatgag
ggaaagtactgggaacgtctcgaatcggtgaaagagatccccctatgctggttgccacgt
gacggagagtgtttgtcgttgtcaagtccacaaatcgcatcgagactgctcatcaacggc
gactggacacatctccataaatgcgccgtcgctttgaaccaactcgtggatatgtgtcgt
ggacggtccccttctacccatcagagaccaatgtcgatctattcgaagggaaaatgggcg
accgacgtggcgagaatgatgaaaaaagttcggagttcaacggaagcggatcatttgttg
aagaatgcggatccgattgagggactcttgaaaatcaatcgaatagttctgatcgatcga
tggctggatccgttgactccaatgctctctcaactcacatttttcggattactcgatgaa
atttatgggattggaatggtgaattcggtgaaagttccagagacagagttcacgaatcag
ggggataaggatgggaatccatttgatgagaagattgagaaggaagttcatttgagagat
gaagtatatcatagactcaaacactctcatatcaatgcgattagtaatgaggcatcgaaa
gttttggctgaaattcgagatgatgagcagttcgatcgtgagaagatgtccgtcgccgag
tattccgttctcgtcaagaaaatgccaaaaatcttaaatcgaaagaaaatgattgaagta
cacatgagactggccgagatgattcagggacacgtctattgcaaattatcggattccatc
aaaatggaaagagattggatcagtgaaatgctccaatttcagttgactcgtccactgaag
atttcctccataagtggtctcgtgttttctctccgtgtaggagatccactcgatctctcc
agtttcgaagtccttgatggcaatagcccaggattgagtaattggaaggggtttgctaat
aatagacattatattgatttagatggagtaactgaagggtataacagcaagttgactcgt
ccactggagatttcctccataagtcgtctcatgcttcctttccgtgtaggagatccactc
gatctctccagtttcgaagtccttgatggcgatagcccaggattgagttggaaggggttt
gctaatagcagacattatattgagttagatgggataactgatgtataa

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