Caenorhabditis remanei (nematode): GCK72_008598
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Entry
GCK72_008598 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04140
Autophagy - animal
crq04142
Lysosome biogenesis
crq04145
Phagocytosis
crq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
GCK72_008598
04142 Lysosome biogenesis
GCK72_008598
04140 Autophagy - animal
GCK72_008598
04148 Efferocytosis
GCK72_008598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_008598
Membrane trafficking [BR:
crq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
GCK72_008598
Hops complex
GCK72_008598
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
zf-CCCH_6
Motif
Other DBs
NCBI-GeneID:
9806138
NCBI-ProteinID:
XP_053586485
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Position
III:complement(<2234763..>2246539)
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AA seq
535 aa
AA seq
DB search
MAAGSDDRDDAAAILNWEGTNEIKSANEYSRNLLFSILDSLDGNKTIVWDRDRSVMHRVN
LFAGASVLAAHGVVANHSIETKKIATTPHVVFFLAPTMVSLDLLCDYIDNVRNDTKILYQ
VFFIPEAWYVVRESLKLRNEGKYWERLESVKEIPLCWLPRDGECLSLSSPQIASRLLING
DWTHLHKCAVALNQLVDMCRGRSPSTHQRPMSIYSKGKWATDVARMMKKVRSSTEADHLL
KNADPIEGLLKINRIVLIDRWLDPLTPMLSQLTFFGLLDEIYGIGMVNSVKVPETEFTNQ
GDKDGNPFDEKIEKEVHLRDEVYHRLKHSHINAISNEASKVLAEIRDDEQFDREKMSVAE
YSVLVKKMPKILNRKKMIEVHMRLAEMIQGHVYCKLSDSIKMERDWISEMLQFQLTRPLK
ISSISGLVFSLRVGDPLDLSSFEVLDGNSPGLSNWKGFANNRHYIDLDGVTEGYNSKLTR
PLEISSISRLMLPFRVGDPLDLSSFEVLDGDSPGLSWKGFANSRHYIELDGITDV
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaggtagtgatgaccgagacgatgcggctgcaattctcaattgggagggaaca
aacgagatcaaaagtgccaacgaatacagcagaaatcttctcttctcgattctcgactca
ctggatggtaacaagacgatagtttgggatagggatcggagtgttatgcatagagttaat
ttgttcgccggtgcgtctgtgctcgccgctcacggagtggtcgcaaatcactcaatcgag
acgaaaaagattgccacaacgcctcatgtcgtcttcttcttggcgccaacgatggtttcc
ctggatttattgtgtgattatatcgataatgtgcgaaatgatacgaaaatcctgtaccaa
gtgttctttatcccagaagcgtggtacgttgttcgagagagtttgaagttgagaaatgag
ggaaagtactgggaacgtctcgaatcggtgaaagagatccccctatgctggttgccacgt
gacggagagtgtttgtcgttgtcaagtccacaaatcgcatcgagactgctcatcaacggc
gactggacacatctccataaatgcgccgtcgctttgaaccaactcgtggatatgtgtcgt
ggacggtccccttctacccatcagagaccaatgtcgatctattcgaagggaaaatgggcg
accgacgtggcgagaatgatgaaaaaagttcggagttcaacggaagcggatcatttgttg
aagaatgcggatccgattgagggactcttgaaaatcaatcgaatagttctgatcgatcga
tggctggatccgttgactccaatgctctctcaactcacatttttcggattactcgatgaa
atttatgggattggaatggtgaattcggtgaaagttccagagacagagttcacgaatcag
ggggataaggatgggaatccatttgatgagaagattgagaaggaagttcatttgagagat
gaagtatatcatagactcaaacactctcatatcaatgcgattagtaatgaggcatcgaaa
gttttggctgaaattcgagatgatgagcagttcgatcgtgagaagatgtccgtcgccgag
tattccgttctcgtcaagaaaatgccaaaaatcttaaatcgaaagaaaatgattgaagta
cacatgagactggccgagatgattcagggacacgtctattgcaaattatcggattccatc
aaaatggaaagagattggatcagtgaaatgctccaatttcagttgactcgtccactgaag
atttcctccataagtggtctcgtgttttctctccgtgtaggagatccactcgatctctcc
agtttcgaagtccttgatggcaatagcccaggattgagtaattggaaggggtttgctaat
aatagacattatattgatttagatggagtaactgaagggtataacagcaagttgactcgt
ccactggagatttcctccataagtcgtctcatgcttcctttccgtgtaggagatccactc
gatctctccagtttcgaagtccttgatggcgatagcccaggattgagttggaaggggttt
gctaatagcagacattatattgagttagatgggataactgatgtataa
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