Caenorhabditis remanei (nematode): GCK72_008743
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Entry
GCK72_008743 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00061
Fatty acid biosynthesis
crq00071
Fatty acid degradation
crq01100
Metabolic pathways
crq01212
Fatty acid metabolism
crq04146
Peroxisome
Module
crq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GCK72_008743
00071 Fatty acid degradation
GCK72_008743
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GCK72_008743
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crq01004
]
GCK72_008743
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crq04147
]
GCK72_008743
Enzymes [BR:
crq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GCK72_008743
Lipid biosynthesis proteins [BR:
crq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GCK72_008743
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of breast milk
GCK72_008743
Exosomal proteins of breast cancer cells
GCK72_008743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9806672
NCBI-ProteinID:
XP_053586588
UniProt:
A0A6A5H141
LinkDB
All DBs
Position
III:complement(2950308..2957841)
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AA seq
696 aa
AA seq
DB search
MTNETALTLAAAVIGSTYFLYCKLLKTAKLSLPNGLSVDRQAVEVKGQPGVWKSALMENE
QEDVLTRFYPEVATIHDVFLKGKEMSSSRIYGSTESKGGPCVGTRSSGTSDYEFLSYDEV
HEKAKKLSMTLVHEFGLTPGNTTNIGIYARNSPQWLISALACIEQSMVVVPLYDTLGAEA
ATFIVSQAEISVVIVDSYKKAECLVQNRHNMPSLKSVIVIDSAELLNGPTTIDSIRIESF
DSALSLGAQYEYSNNLPKPEDNYIICYTSGTTGTPKGVMLTHSNIVANISGFLKILFAFQ
PSMIDTTQVHISYLPLSHMMEQLTHWTLLGFGSKIGYFRGSIQGLTDDIKSLKPTVFPVV
PRLLNRLYDAITSKVQQQGFMAKLVYNFAFARKLSQVKAGKGGRDTIWDRLVFRKIQEQI
GGKVDLMVTGSAPISSTVLETCRVTLGATIVEGYGQTECTALATFTWMGDPSTGHCGAPA
PCALVKLGDVPDLNYFAKDGKGEIRIKGPCVTKGYYKDPERTAELFDEDGFLQTGDIGEM
LPNGCIRIIDRKKHIFKLAQGEYVAPEKIEQVYIRTPVAQQVYVDGDSLERWLIAVVVPE
PDVMMEWNEKQGAGQRSLEEICKDEKAKEFVLSELHAIGKANKLNSIEQVKKVILSTDPF
TVENGLLTPTLKAKRPQLRLKYKDGMAKVYKQFPNL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgagacagctctaacattggcggccgcggtcatcggatccacatattttcta
tattgtaaattgctgaaaactgcaaaattgtcacttccaaatggtctatctgttgataga
caagctgttgaggttaagggtcaacctggcgtctggaaaagtgctcttatggaaaatgag
caagaagacgtgctcaccagattctatccagaagttgccactattcatgatgtcttcttg
aaaggaaaagagatgtccagcagtcggatttatgggagtacggagagcaaagggggaccg
tgtgttggaacgagatcgtctggcacctcggattatgaatttttgagttatgatgaggtt
cacgagaaggcgaagaagttgtcgatgacgttggttcatgagtttgggcttacgccaggc
aacacgacgaacatcggaatctacgcgcgtaactctccacaatggttgatcagcgctctg
gcgtgtatcgaacagtcaatggttgtagtacctctgtatgatactctcggtgcagaagca
gccactttcattgtgtctcaagcagagatcagtgtggtcatagtggattcatacaagaag
gccgagtgcttagttcagaatagacataacatgccgagtttgaagagtgtcattgttatt
gatagtgctgagttattgaatggaccgaccacaatcgactcgatccgtatcgagtccttc
gacagtgctctgtccctcggagcccaatacgaatacagcaataacctcccaaaaccagaa
gacaactacatcatctgctatacatctggaactactggaacaccaaagggtgtcatgttg
actcactcgaacatcgtagccaatatcagcggatttttgaaaatcttattcgctttccaa
ccatcgatgattgatacaacacaggtccacatctcatacctcccactatcccatatgatg
gaacaactcacccactggactcttctcggattcggatcaaaaatcggttatttccgagga
agtattcaaggactgactgacgacatcaagtcactcaaacccaccgtattcccagtagtg
ccacgtctgttgaaccggctttatgacgcgattacgagcaaagtgcaacaacagggattc
atggctaagctagtctacaacttcgcatttgccagaaaattgagtcaagtgaaggcagga
aaaggaggaagagataccatttgggaccgtctcgttttccgtaagattcaggaacaaatc
ggaggaaaagtggacttgatggtcactggatccgcaccaatctcatctacagtactcgag
acttgtcgtgtgacacttggagccacgattgttgaagggtacggacagacagagtgtact
gcattggctacgttcacgtggatgggcgatccgagtactggacattgtggagcaccggcg
ccatgtgcgttggtaaagttgggagatgttccggatttgaattattttgcgaaggatgga
aagggagagattcgtatcaaggggccatgtgtcacaaaaggatactataaggatccagaa
agaacggccgaattgtttgatgaagatggattccttcaaacgggagatattggagagatg
cttccaaatggatgtattcgaattattgatagaaagaagcacattttcaaactggcacaa
ggagagtacgtggcacctgagaagatcgagcaagtctatattagaactccagttgcacaa
caagtatacgtggatggagatagtttagagagatggctgattgcagtcgttgtccccgag
ccagatgtgatgatggagtggaatgagaagcagggagctggacagagaagtttggaagag
atttgtaaagatgagaaggcgaaagagtttgtgctcagtgagctgcatgcgattggaaag
gcaaacaagttgaattctattgaacaggtcaaaaaagtgattctatccaccgatccattc
actgttgaaaacggtctcctcaccccgacactgaaagcgaaacgaccacaattgaggctg
aaatataaggatggaatggcgaaagtatataaacaattcccgaatctatga
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