Caenorhabditis remanei (nematode): GCK72_008753
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Entry
GCK72_008753 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03430
Mismatch repair
crq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GCK72_008753
03460 Fanconi anemia pathway
GCK72_008753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_008753
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
GCK72_008753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
9806345
NCBI-ProteinID:
XP_053586597
UniProt:
A0A6A5H152
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Position
III:<3005695..>3012063
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AA seq
754 aa
AA seq
DB search
MGLIQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDN
GKGIERDDFDLVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVSKVNIVSKREDGKC
AYQANYLDGKMLAPTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEESKMVHDTILRFA
IHRPDVSFALHQNQSSDFRTKGDGNFRNVVCTLLGRDLADTVLPLSLESTRLKFKFTGNV
SKPIASATSKNSQNRKTSRSFFSVFINGRSVRCDILKHPIDEVLQNRSLFCQFVALHLEI
DETRIDVNVHPTKSSVIFLEKEEIIEEIREYFEKFVSDIFGFEPRGNVKDEEDQEAEFSF
SQVPIINMQSIKSIEAIRRPSVSNEKEFKPSPTSWKTEKKRVDHMEVRTDAKERKIDEFV
VRCPGLKRPRTDSEDVFRDEEEDVDERIQRNLEFNDEVSMVSVASTVDRRLNESQDLGED
EELECATTHREFQFESLETLRKQIVSNASLSLRELIRTSTFVGSIDPETVLIQFGTSLFQ
MNFSAVLREFFYQISIFSFGNYGSYRLDDEPPAVIELLELIGDVSKTDENYKDFGVFCDE
GARIEAEILLAQHSELLHDYFAIKMEWIGEIPDERRLHVTEIPSLVHHYVPQLEKLPFLI
ASLILDVDYDDEQKCFESISRAIGDLFTIHTHFITAEKKVSEFSTMHWKPLIKQILMPLV
KRKFIPPEHFKEREVIKQLADSHDLYKVFERCGS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggggttaatccaacgtctaccacaagacgtggtgaatcgaatggcagctggtgaagtg
ctcgccagaccgtgtaacgcaatcaaggagctcgtcgagaattcattagacgccggtgcc
accgaaatcatggttaatatgcagaatgggggtctgaagcttcttcaagtgtcggataac
gggaaaggcatcgagcgggacgatttcgatctcgtttgtgagcgattcgccacgtcgaaa
cttcagaaattcgaagatttgatgcacatgaagacgtacggattcagaggagaggcattg
gcttcgttgagccacgtgtcgaaagtgaatattgtttcgaagagagaagatgggaaatgc
gcgtatcaggctaattatttggatggaaaaatgctggcaccgacgaaaccagcagccgga
aaaaacgggacatgcatcacggcgaccgatcttttctataatcttccgacacgtcgaaac
aagatgacaactcacggagaagagtcgaaaatggttcatgacaccattcttcgattcgcc
attcatcgaccagacgtctcattcgcgctccaccagaatcaatcaagtgattttcgaacg
aaaggcgacggaaatttccggaatgttgtgtgcactttgttgggaagagatttggcggat
acggtgctgccactatcccttgaatcgactcgtctgaaattcaaattcactggaaacgta
tcgaaaccaatcgcctccgccacgtcgaaaaattctcaaaatcgaaaaacgagtcgttca
ttcttcagtgtcttcatcaacggacgaagtgttcggtgtgatattttgaagcatccgata
gacgaagtccttcagaatcgttctctattctgtcaattcgtggcacttcatctggaaatc
gatgagacacgaattgatgtaaatgtgcatccgacgaagagttctgtgatttttctagag
aaagaggagattattgaggagattcgggagtatttcgagaagtttgtcagcgatattttt
ggattcgagccaaggggaaatgtgaaagacgaggaggatcaggaggcggagttctcattt
tcacaagttccgataatcaatatgcaatcgattaaatcgatcgaagcgatcagaagaccc
tctgtttccaatgaaaaagaattcaaaccaagcccaacatcgtggaaaaccgaaaagaaa
cgagtagatcacatggaagtccgaacggatgcaaaagaacgaaaaatcgacgaattcgtt
gtgagatgtcctggactgaaaagacctcgaacggattcagaagacgtttttcgggacgaa
gaagaagacgtcgatgaacggattcagaggaatctagagttcaatgatgaggtgtcgatg
gtgtcggtggcgagtacggtggatagacgattgaatgaatcacaggatttgggggaggat
gaagagttggagtgtgcgacaactcaccgtgaattccaattcgaatccctcgaaactctc
cgcaaacaaatcgtctcgaatgcctccctttccctccgtgaactcatcagaaccagcact
ttcgtcggctcaatcgacccggagaccgtcctgattcaattcggcacttcactattccaa
atgaatttctccgcggttctccgcgaattcttctaccaaatctccattttttcatttgga
aattatggatcgtatcggttggacgatgagccaccggcagtcatcgaactattggaattg
attggggacgtgagtaaaaccgatgagaattataaggatttcggagtattctgtgatgag
ggagcgaggatcgaagcagagattttattggctcaacattcggagttgcttcatgattat
tttgcgattaaaatggaatggattggcgaaataccagatgagaggagactccacgtcaca
gagattccgtcgcttgtccatcattatgtaccgcaactcgaaaaacttccattcctcatc
gcctctctaattttggacgtcgactatgatgatgagcaaaaatgtttcgaatcgatctct
cgtgctatcggagatctcttcacaattcacactcatttcataaccgccgagaagaaggtg
tcagaattctcgacgatgcactggaagccactcatcaaacagatactaatgccacttgtc
aaacggaaattcatccctcccgagcattttaaggagcgggaagttattaaacaactcgca
gattctcatgatttatacaaagtttttgagagatgtggatcttga
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