KEGG   Caenorhabditis remanei (nematode): GCK72_008795
Entry
GCK72_008795      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K11374  elongator complex protein 2
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crq03016]
    GCK72_008795
Transfer RNA biogenesis [BR:crq03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    GCK72_008795
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 9806376
NCBI-ProteinID: XP_053586625
UniProt: A0A6A5H184
LinkDB
Position
III:complement(<3228097..>3231162)
AA seq 769 aa
MKIKEEFISASVNPRSHCLVACKSAPFVVYASSLQIALQTVPKDDTEVGVIKSTSERRHQ
KPITVLKRLKSSGKVDEFVSGDVNSRVNLWKLSGERVEYVAELLGCSGSIGTVCGVAEEN
RKVVAAAWVSYPNNGFEAWWTSPTGELLNSTKIELDQKAFALCLDAISLQNFVLLAVGTS
KRFVELYGESEDRKTFSRLVSVAGHTDWIHSIAFNDDPYNLLVASAGQDTYVRLWSIEPE
SATHPEPPKIPAALLDEDTDTPDELTSSANLFTFNNSTLRCSSHAVMQGHDDWVHSTVWS
ENGRVLLTASSDKTCIIWREIDNLWRDDVRLGIVGGQAAGFFSAVFLNTDVEHSETHSED
VVVSSSYFGGLHAWKSSDDQKTFWSSLPMTGGHVGEVRDVDWHESFLMSVGQDQTTRAFA
KSEKQQVYLEIARPQVHGHDMQCLSFVNPSVFVSGAEEKVFRAFRAPKSFVKSLESITGI
PAEKSFGTSQLAEFGACVPALGLSNKPMVEGETVDGEHWEEDAFRAAPTILTAAPTEDTL
QQNTLWPEEHKLYGHGYEVYAVTANPTGTVLATACKSSHTEHSVVMLWNTADWSKRADII
GHQLTVTQIAWNPSGTILLTVSRDRTAKLYKEKTGDVNGFDYECVWTSGKEHTRILWACD
WIDDQHFVTVARDQKVIVWSAEGAPKAQLKLDEPVTAVAASGDLVVAGLQTGELVVLRFT
GENLEVVEKIGSNAIKIDAAVLRLRFSKCGRKLAVATSDAKLRVFDFTV
NT seq 2310 nt   +upstreamnt  +downstreamnt
atgaaaatcaaggaagaattcatctcagcaagtgtaaacccccgctctcactgcctagtt
gcttgcaaatcggcgccgttcgtcgtatatgcttcttcccttcaaatcgctctacaaact
gttccaaaagatgacacagaagtcggtgtaatcaagagcacctcggaacgtcgtcaccaa
aagccgattacagttttgaaaagactgaaatccagtgggaaagtcgatgaattcgtgtca
ggagacgtcaattcccgtgttaatttgtggaaattgagtggagaacgagtggaatacgtg
gcagaacttctaggttgttctggaagtattggaacagtttgtggagtggcagaagagaat
agaaaagttgtagccgctgcgtgggtgtcctacccaaacaacggatttgaggcgtggtgg
acttcacctaccggcgaacttttgaattctacaaaaatcgaattggatcagaaagcattt
gccctctgtctagacgctatttccctccagaattttgttcttttggcggtgggaacttcg
aaacgattcgtggagttatatggggaatcggaggatagaaaaacgttttccagactagtt
tcggtagcaggacacactgattggatccattcgatcgcgtttaatgatgacccctacaat
ctattagttgcctctgctggacaggacacttatgtcagactgtggtctatcgaaccagag
tccgctacccacccagaacctccgaaaattccagcagccctgctcgacgaagacactgac
actccagatgagctgacgtcttctgcgaatctcttcactttcaacaactccacactccgt
tgtagttcgcatgcagtaatgcagggacacgatgactgggttcattcgacggtttggagt
gagaatggacgagttttgttgacggcgtcgagtgataaaacgtgtattatctggagagaa
atcgataatttatggagagatgatgtgagattgggaattgttggaggacaagcggcggga
ttcttttccgcggtgtttttgaacacagatgttgaacattccgaaacacattccgaagac
gtcgttgtcagctcctcctactttggtggtctccacgcctggaagtcttctgatgaccag
aagacgttctggtcgtcactcccgatgaccggcggtcatgttggagaagttcgagatgtc
gattggcatgagtcattcttgatgtcagttggacaggatcagacaacgagagcattcgct
aaaagtgagaaacaacaagtctacctggaaattgctcgtccccaagttcatggacatgat
atgcagtgtctctcattcgtcaatccatctgttttcgtttctggagccgaggagaaagtg
ttcagagcgttccgtgctcctaaatctttcgtcaaaagtttggaatcgatcaccggaatt
ccggcggaaaaatcattcggcacgagtcaactcgctgaattcggagcatgtgttcctgct
ttaggactgtcgaataagccaatggttgaaggagagacagtggatggagagcattgggaa
gaggacgctttcagagcagctcctactattttgacagctgctcccactgaagacaccctc
caacagaacacgctttggccggaagaacacaagttatatgggcatggatatgaggtttat
gcagttacagccaaccccactggaacggttttggctactgcttgcaagtcgagtcacacg
gagcactctgtagtgatgctctggaacaccgcggattggtcgaaaagggcggatatcatt
ggccatcagttgacagttacacagatcgcgtggaatccatcgggaactattcttctgact
gtaagcagagacagaactgcaaagttgtataaggagaagacgggagatgtcaatggtttc
gactatgaatgtgtctggacttctggaaaagaacatacacgaattttgtgggcttgcgat
tggattgatgatcaacactttgtcacggtggctcgagaccagaaagttattgtttggagt
gctgaaggagcaccaaaagcgcaattgaagttggatgaaccagtgactgccgttgctgct
tctggagatttggttgtggcgggacttcagactggagagcttgttgttcttcggtttact
ggagagaacttggaagtggttgagaagatcggatcaaatgctatcaaaatcgatgcagca
gttttgcgcttacgattttcaaagtgcggaagaaaactggcggtggcgacgagtgatgca
aagttacgtgtctttgatttcactgtgtag

DBGET integrated database retrieval system