KEGG   Caenorhabditis remanei (nematode): GCK72_009039
Entry
GCK72_009039      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GCK72_009039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crq03000]
    GCK72_009039
   03021 Transcription machinery [BR:crq03021]
    GCK72_009039
Transcription factors [BR:crq03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    GCK72_009039
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GCK72_009039
  RNA polymerase III system
    TFIIIB
     GCK72_009039
  RNA polymerase I system
    SL1/TIF-1B
     GCK72_009039
SSDB
Motif
Pfam: TBP DUF3378 Hexapep
Other DBs
NCBI-GeneID: 9808089
NCBI-ProteinID: XP_003095891
UniProt: A0A6A5H197 E3N6Q2
LinkDB
Position
III:complement(<4369745..>4374065)
AA seq 338 aa
MNMNSPASRSMLGGETPAHGGPSSVLGGPSSILTGHGPNSVMGPNSILGPGSMVNPQSIQ
PMQSHQMHSLQGSSMQMHSHLANSNLNLNINPASVGPDRNPGSVMHHSMDINPPSVAFQN
LAIPMTPIAYNNFERDSLIHPPASNIAATMVPATPASQLDIPMPALQNIVSTVNLGVPLD
LKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEASRLAARKYAR
IVQKLGFQAKFTEFMVQNMVGSCDVRFPIQLEGLCITHAQFSTYEPELFPGLIYRMVKPR
VVLLIFVSGKVVITGAKTKKDIDDAFGQIYPILKGFKK
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaatatgaacagtccggcgagtcgttcaatgcttggcggtgagacccctgctcacggt
ggtcccagttcggttctcggaggaccgtcgtcgattctaacaggtcacggaccgaattca
gtgatgggacccaattcgattctcggtcctggaagtatggttaatccacaatcgattcaa
ccgatgcagtcgcatcagatgcatagtctccaaggctcctcaatgcaaatgcactctcat
ctcgccaattccaatctgaatctcaacataaaccccgcctccgtgggaccagaccgtaat
ccgggatcagtaatgcatcacagtatggatatcaacccaccgtcagtcgcctttcaaaat
ctggccattccaatgacaccaatcgcctataataacttcgagagggactctctgatccat
ccaccagccagtaacatcgccgccacaatggttccagccactccagcgagtcaactcgac
atacccatgccggctcttcagaatattgtttcaactgtcaatttgggagtcccattggat
ctgaaaaagattgctttgcacgccagaaacgccgaatacaatccgaaacgtttcgcggcg
gttatcatgagaattcgtgagccgagaactactgctctcatcttttcaagtggtaaaatg
gtgtgcactggagcgaaatcagaggaggctagtcgacttgctgctcgaaaatatgcgaga
attgtacaaaaattgggattccaggcgaaattcactgagtttatggtccaaaacatggtc
ggctcatgcgatgtccgtttcccgattcaacttgaaggattatgcattactcacgctcag
ttcagtacctatgagcccgaactgtttcccggattgatttatcgaatggttaagccgaga
gttgtgctgctgatttttgtgtcgggaaaggttgttatcactggagccaaaacgaagaag
gacattgacgacgcgttcgggcaaatctatcctatattgaagggattcaagaaataa

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