Caenorhabditis remanei (nematode): GCK72_009117
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Entry
GCK72_009117 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03254
translation initiation factor 3 subunit A
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
crq03012
]
GCK72_009117
Translation factors [BR:
crq03012
]
Eukaryotic type
Initiation factors
eIF-3
GCK72_009117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3a_PCI_TPR-like
PCI
Motif
Other DBs
NCBI-GeneID:
9818301
NCBI-ProteinID:
XP_003103173
UniProt:
E3MKT5
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Position
III:4881914..4885537
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AA seq
1081 aa
AA seq
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MAPNYFQKPEAALKRAEELIQVGKESDALDTLHDTIKARRHKQWTQTHEAIMIKHMELCV
DLKKQHLAKDALFQYKALTQQINVKSLETVVEHFLKLAESKTEEAQKQSIEKVEEIGDLD
QGDVPERLLLAVVSGAAAQDRMDRTVLAPWLRFLWDSYRNCLELLRNNAQVEHLYHQISR
HSFSFCLRYQRRTEFRKLCDLLRMHLNQIQKHQYAPNVNSFRVKLTSPESLALMQDTRLV
QLDTAIQMELWQEAYKSAEDVHGMMQLSKDKDKRTVKPSSYVNYYDKLALVFWKAGNSLF
HAAALLQKFIIYKDMKKSFTQEEAQEQATRVLLATLSIPEGSDSPSDLSRNLDIEEQHVA
NMRLLSNLLRLPIAPTKNGILKEAARIGVPEASGQIAKDLYKLLESNFSPLKVAKDVQAV
LDTITRPDHQQYVESLQAVAAVKALKQVSVIYEAISWERIRKIIPFYSDLALERVVVEAS
KHRIVKAQIDHRADCVRFGSSDATLAGGVDECDNNEGFTGDDTQLGVEGVRNHLEAMYTR
LRVLVEGLDAEKRRKEMVRKIENHVTSYEKNRPTEIDRIHRRKKMLENYKENWERVKAEK
TLQAATEQAKREEAARAEEMKRLDEQNKESERKRKQAEAEEIQKKIKQDQLYKMQQNAIY
QAIIKEKGLDQFRDMDPEQVLREQRERLDKERAETQRRLQQQEKNFDHHVRALHLEEMNE
RRAVMHMRMNEAPKLHDQYEEQRIAKEIAAHEKHVQIWAMWDQVRDATLEWVEEVKVDNR
DNLEKKISEWEIKLEAVRNSRLAERAEKRKKERKELAMQAKIAEERKRREDEERARQAVI
DSQRRPHDRDGRRREMENSAAMQDNDWRRNAPARDAPPPRDSRPMRGDGPTREPREQFIP
SSKADTDSSWRSSAQPRKPDDRRSEEFRRDDGPRRGDDGPRRSDDFRRNENDGPRRGPPL
PVSKADTVDKWERGAKPVTSPPQKTESPPAAAPEPKSDGPKKFVPPHLRNKQGSGTPSEE
TSPRNGANVSSPPDRAQGLRGPPPPSSGGPGGRNLPPRRTDGPPQRNSDTSRNADTGNWR
K
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaattattttcaaaagcccgaggccgctttgaagcgcgccgaagaactcatt
caagtcggaaaagagtcggatgctttggacactctccatgacaccattaaagctagaaga
cacaaacaatggacacaaactcatgaggccatcatgatcaagcacatggaactgtgtgtg
gatctgaagaagcaacacctagcgaaggatgcgttgttccagtacaaagctcttactcag
cagatcaacgtgaaatcgctcgaaacagtcgtcgaacatttcctgaaactcgccgaaagc
aaaaccgaagaagctcagaagcagtcgatagagaaagttgaagaaatcggagatctcgat
caaggagacgttccagaacgtcttctcctcgccgtcgtctccggagcagccgcccaagac
cgaatggatcgtaccgttctcgcaccatggctccgtttcctctgggattcctacagaaat
tgtctggaattgttgagaaacaacgctcaagtcgaacatctttaccatcaaatcagtcgt
cactcgttcagtttctgtctccgataccagcgacgtaccgagttccgcaaactctgtgat
cttctccgtatgcatttgaatcaaattcagaagcatcaatatgcaccgaatgtcaactca
ttccgcgttaaactcacctccccggagtcattggcacttatgcaagacactagattggtt
cagttggatactgctattcagatggagctctggcaagaagcttacaagagtgccgaagac
gtgcacggaatgatgcaactctccaaagacaaggataagagaactgtgaagccatccagt
tacgtcaactactatgacaaactcgctcttgtcttctggaaggctggaaacagtttgttc
cacgccgctgctctccttcaaaagttcattatctacaaggacatgaagaagtcgttcaca
caagaagaagctcaagagcaggctacccgtgttcttctcgccactctctccattccagaa
ggatctgattctccatcggatttgtcaagaaaccttgatatcgaggagcaacacgttgcc
aacatgagacttctctccaacttgctccgtcttccaatcgccccaactaagaacggaatt
ctcaaggaggccgctcgtattggagtaccagaggcttctggacaaattgccaaggatctt
tacaaacttcttgagagcaacttctctccactgaaagtcgctaaggatgttcaagctgtt
cttgataccataactcgtccagatcatcaacaatatgttgaatctcttcaagctgttgct
gcagtcaaggctttgaagcaagtttcggttatttatgaggctatcagctgggaaagaatc
cgcaaaatcattccattctactcggatttggcccttgagagagtcgtcgttgaggccagc
aaacacagaatcgtgaaggctcaaatcgatcatcgtgccgattgtgttcgcttcggttcc
tcggatgctacactcgctggaggagttgatgaatgtgataacaacgagggattcaccgga
gatgatactcaattgggagttgaaggagttcgtaaccatctggaagcaatgtacactcgt
cttcgtgttctcgtcgaaggacttgatgcggagaaacgacgcaaggagatggtccgtaaa
atcgagaaccatgttaccagttacgagaagaaccgtccaaccgagatagatcgtatccac
cgacgcaagaagatgctcgagaactacaaggagaactgggagcgtgtcaaggctgaaaag
actctgcaagctgctactgaacaagctaaacgtgaagaagccgctcgtgctgaggagatg
aagaggctcgacgagcagaataaggagagtgagcggaagagaaagcaggctgaagccgag
gagattcagaagaagatcaaacaagatcaactctacaaaatgcaacagaacgccatctac
caagccatcatcaaggagaagggactcgaccaattccgtgatatggatccagagcaagtg
ttgcgcgagcaaagagaacgattggataaggagagagcggagactcaacggcggttgcag
caacaggagaagaactttgaccatcatgtgcgtgctctccacttggaagagatgaacgag
cgacgtgctgtgatgcatatgagaatgaatgaggcgccgaaacttcatgaccagtatgaa
gagcagagaattgctaaggagattgccgctcacgagaaacacgtccaaatttgggcgatg
tgggatcaagtccgtgacgctactctcgaatgggtcgaagaagtcaaagttgacaaccga
gacaaccttgagaagaagatttccgagtgggaaatcaaactcgaagctgttcgtaacagt
cgtctcgccgagcgtgccgaaaagcgtaagaaggagagaaaggagttggcgatgcaagcg
aagatcgccgaagagcgtaaacgtcgtgaagatgaggagcgtgctcgtcaagctgtcatc
gacagccaacgtcgtccacatgatcgtgacggtcgtcgtagagagatggagaactccgcc
gctatgcaagacaacgattggagaagaaatgctccagcacgcgacgcaccaccaccaaga
gattctcgcccaatgcgcggtgatggaccgactcgtgagccacgtgaacaattcattcct
tcctccaaagccgacaccgattcgtcgtggagatcgtcggcgcaaccccgcaaacctgat
gaccgtcgtagcgaagagttccgtcgtgatgatggaccacgtcgcggtgatgatggacca
cgccgaagcgacgatttccgtcgtaacgaaaatgatggacctcgtcgtggcccacctctc
cctgtttcgaaggctgacaccgttgataagtgggagcgtggagcgaagcctgtcacctca
ccacctcaaaagaccgaatccccaccagccgccgcccctgagccgaaatccgatggaccc
aagaaattcgtcccaccgcatctccgaaacaaacaaggcagtggcacaccgtccgaagaa
acatctccacgcaacggagccaatgtttccagccctccagatcgtgctcaaggactccga
ggcccaccaccaccatcatccggtggcccgggaggacgcaacctgccgccacgtcgtacc
gatggaccgccacaacgcaattcggacacctcaagaaacgctgataccggaaactggaga
aaataa
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