Caenorhabditis remanei (nematode): GCK72_009296
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Entry
GCK72_009296 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GCK72_009296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_009296
Spliceosome [BR:
crq03041
]
Complex B
Other components
RES complex
GCK72_009296
Complex C
GCK72_009296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bud13
XylA2_C
DUF5088
Motif
Other DBs
NCBI-GeneID:
9800443
NCBI-ProteinID:
XP_003098218
UniProt:
E3N082
A0A6A5H3J3
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All DBs
Position
III:<5769330..>5770954
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AA seq
475 aa
AA seq
DB search
MTSKADYLKKYLSPANGDQEKKKKKKKKDGPKGIRLIEEDAFLSVDAAKVKDIGSDEERE
EIEVLKQSAKKAKVVHGFKQTFAQVEALKEVKNEPLSPGDSPPRKTRHRHDSDDNSPPRA
SRKRHDSDHSPPRSSRNRHDSDNSPPRPSRRRHDSDEDNSPPRRSTGRQRHDSDNSPPRA
NRQRRDSDNSPVRRRASPPRRTRHDSDNSPPRARARRDSDNSPPRRRDRDSSPPRRRRDD
SSPPRKTRKIEEPKMIKKEEPDSDTEVSRKTLDGKRSGLQSAKDLKEESDKLRAKNAKVF
EEMDSSVSGRFADTVYRQKQTKRKGRDAEEDQEKKEREAKKTEELKEKYKSWNKGVAQIE
DRRAQLEEMARVAAEPMARARDDDAMNAHLKEVLHAADPMANIIQKKRRDTAIDRGELVY
PSYHGHWVPNRFNIAPGYRWDGVDRSNGFEGKLAKTANTKTANQSEYYKSIAEYE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaaagcagattacttgaaaaagtatttatcacctgctaacggcgatcaagaa
aagaagaaaaagaaaaagaagaaggatggaccgaaaggaatccgattaattgaagaagac
gcgtttctttctgtagatgctgcaaaagtgaaagatatcggatctgacgaagaacgagaa
gaaatcgaagtactgaagcaaagcgccaaaaaagccaaggtagtgcatggattcaaacaa
acatttgcccaagttgaagctctgaaagaagtgaaaaatgagccattgtcgccaggtgat
tcacccccaagaaaaacgcgtcaccgtcacgacagtgatgataattctcctccgagggct
tcaagaaagcgtcatgacagcgatcactcgccaccgagatcatctagaaaccgccatgac
agcgacaattcaccaccaagaccttcgagaagaagacacgatagtgatgaagataactcc
ccgccaagacggtcaactggccgacaacgtcacgacagcgacaactcaccacctagagca
aatcgacagcgaagagatagtgataattctccagttcgtcgccgtgcctctccgcctcgc
cgaactcgacatgatagtgacaactccccgccacgtgctcgtgctcgtcgtgattctgac
aactctccgccaagaagacgtgaccgagattcttctcctcctcgccgacgtcgtgatgat
tctagtccgccgagaaaaacgagaaagattgaagagccgaagatgataaagaaagaagaa
ccggatagtgatacagaggtttctagaaagactttagatggaaagaggtcaggattacaa
tcggcgaaggatttgaaggaggaaagtgacaagttaagagcgaaaaatgccaaggttttc
gaagaaatggatagttccgtgagtggacgattcgctgacaccgtctatcgacagaagcaa
acgaagagaaaaggaagagatgctgaagaagatcaagagaaaaaggaaagagaagcgaag
aagacggaagaattgaaagagaaatacaaatcttggaataaaggagttgcacagattgag
gatcgaagggcacaactggaagaaatggcaagagttgcagctgaaccaatggcgagagct
cgtgatgatgatgcaatgaatgctcatctgaaagaagtgcttcatgcagcggatccaatg
gccaatataattcaaaagaagcgacgagatacagcgattgatagaggagaacttgtctat
ccatcgtatcatggtcactgggtacccaatcgattcaatattgctcctggatatcgatgg
gatggagttgacagatcgaatggattcgaaggaaaactcgccaaaactgcaaacacaaaa
acagccaatcaatccgaatattacaagtctattgcagaatacgagtga
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