Caenorhabditis remanei (nematode): GCK72_009478
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Entry
GCK72_009478 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K09108
transcription factor AP-4
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crq03000
]
GCK72_009478
Transcription factors [BR:
crq03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
GCK72_009478
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
COE1_HLH
DUF4398
betaPIX_CC
Motif
Other DBs
NCBI-GeneID:
9814956
NCBI-ProteinID:
XP_003113142
UniProt:
E3LSB0
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Position
III:complement(<6496380..>6498987)
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AA seq
427 aa
AA seq
DB search
MVRSDSAEEDQIINEDGFDLTEEDEEMMSSGTGALPVTITDWSSMTNGRIAPPSIMSAAS
AFDLTASGMQNSLRSVLPTSTIGHAPMLANRSLSQPAPLSPTSLDPDRRSRMRRQIANCN
ERRRMQSINAGFMALRALLPRKEGEKLSKAAILQQTAEMVHQLLGGKSIDDLPDGGEPKK
LKLEEDHQDADHHAQIAHLQTVLETERAARKSLENQVIQLRELLQMTTTSSQASSPVTPR
SNGSSGFSLPPSYASSALPTPLRESPERKPSFHDSTSTPLSLLTLNGSPTSSESLTAPRI
LHPTRLPSLETTVIRPTPLPPISVEVSSPSLSTPSPLTAAPIIFSTAPPQSSILFQTVTS
AMSTGNSTPVGLPHHLQGHNSAFVSTQPSMSLSQSMQTIVEAIRHLEGGSHFIPTSPPPT
SQTSLVR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggttcgttcagatagtgcagaagaggatcaaatcatcaatgaagatggatttgatcta
actgaagaggacgaggagatgatgagttcgggtacaggtgcattgcccgtgactataacc
gactggagttcaatgacaaatggacgaattgctccaccatccatcatgtcggctgcttcg
gcattcgacctgacggcttctggaatgcagaattcgttacgttccgtcttgcctacctcg
acgattgggcatgcaccaatgctcgccaaccggtctctatctcaaccggcgccactgtca
ccgacatcgctcgaccctgatagaagatccagaatgcggaggcaaatcgctaattgcaac
gagcgacggcggatgcagagcatcaatgctggatttatggctcttcgagctttacttcca
cgaaaagaaggcgaaaagttgtcgaaagcggcgattctgcaacaaactgctgagatggtt
catcaacttttgggaggaaagagtattgatgatttgccggacggtggagagccaaagaaa
ctcaaacttgaagaagatcaccaagacgctgaccatcatgcgcaaatagctcatctccaa
actgttttagaaacagaaagagccgctcgtaaatcattggagaaccaagtaattcagctc
cgtgagctgctacaaatgacgacaacgtcatctcaagcatcgtcccccgtgacaccaaga
tccaatggatcatctggtttcagtctaccaccatcgtatgcttcatcggctcttccaact
ccgttgagagagtctcctgaacggaaaccatcatttcatgactcaacaagtactccattg
tctctactaacactcaatggatccccaacgtcatctgagtcattgacggcgcctcgaata
cttcatccaacgaggctgccgagtctagaaacaactgtcatccgtccgacacctttacca
cctatatctgtagaagtatcatcgccatctctgtcaactccatcgccattgacggccgct
ccgataatcttctcaacagcgccacctcaatcgagtattctgttccaaacggtcacctcg
gccatgtcgactggcaattcaacgcccgtcggattgccgcatcatctgcagggacataat
tctgcgtttgtgagtacccaaccaagtatgtcattgtctcaatcaatgcaaacaattgtc
gaggcgattcgtcatttggaaggaggatctcatttcattccaacatctcctccacctact
tcacaaacgtcactcgtccgctga
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