Caenorhabditis remanei (nematode): GCK72_009599
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Entry
GCK72_009599 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03022
Basal transcription factors
crq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCK72_009599
09124 Replication and repair
03420 Nucleotide excision repair
GCK72_009599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_009599
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_009599
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCK72_009599
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCK72_009599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
9814917
NCBI-ProteinID:
XP_053587028
UniProt:
A0A6A5H4A6
LinkDB
All DBs
Position
III:complement(6924773..6925969)
Genome browser
AA seq
296 aa
AA seq
DB search
MSTLSVLIEASSCSWGKLASQHGDRTIGIILRSIVSFCNAHLGQSASNQLLVFAYGRNES
KNMIYSSARSDDRNASFIVVDRLKDLLTNDSGNSDATIGAPLGPALAHAFCHMKKDSRIT
TADPCDDSLGPAATSEQSESSTEKVTNRAVVISMSPIMGSEHGSLMNLFFSAAKQSICVD
VVSMGDDFTGGILQQAADITGGSFLHAQKPPALLKILMTNMLTDPSYRTAFSKLSHSSVD
YRASCACHHKLVSSGWVCSVCLSVLCQYTPICKVCRAAFTITNIPKKPNRKRTLRS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcacattatctgtattgatcgaagcatcgtcttgttcttgggggaaactagctagt
cagcatggtgatagaacaattggaataatccttcgttctattgtttcattctgcaatgca
catttgggtcaatccgcatctaatcaacttctcgttttcgcatatgggcggaatgaatcg
aaaaacatgatatattcatcggccagatctgatgataggaacgcatccttcattgttgtt
gatagattgaaagacttattaacaaatgattccggaaactctgatgcaacgataggagct
cctcttggacctgcattggctcacgctttctgtcacatgaagaaagacagtagaataaca
actgcggatccatgtgacgattctcttggaccagctgctacttccgaacaatcagaatcc
tctacagagaaagtgacgaatcgagcagttgtgatctctatgtcaccaataatgggaagt
gaacatggctcactgatgaatctgttcttttccgctgccaaacagtccatatgtgtagac
gttgtttcaatgggagacgacttcactggcggaattcttcaacaagctgccgatatcact
ggtggctcgtttcttcatgcccaaaaaccaccagctcttttaaaaatactaatgactaac
atgctcactgatccatcttatcgtactgctttctcaaagctatcccacagttctgtcgat
taccgagcgtcttgtgcctgccatcacaaacttgtctcatccggatgggtttgctctgtc
tgtctatccgtcctctgccaatatactccaatctgtaaagtatgccgagcagctttcacg
atcacaaatatcccgaagaagcctaacagaaagcgtacactcagatcttaa
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