Caenorhabditis remanei (nematode): GCK72_009600
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Entry
GCK72_009600 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GCK72_009600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_009600
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_009600
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GCK72_009600
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
GCK72_009600
PBAF complex
GCK72_009600
GBAF(ncBAF) complex
GCK72_009600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
9814964
NCBI-ProteinID:
XP_003113309
UniProt:
E3LRY4
LinkDB
All DBs
Position
III:6928173..6929765
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AA seq
446 aa
AA seq
DB search
MQPQQRPPVPQGSRYGHPGTPQQARRPINAPLPGQSTQLQGNRVPQPPKKKKRYADKLIQ
PKVRELVPESQAYMDLLAFEQKLDSTITRKKIDVQEALKRPQKIKKRLRIYISHTFIAGK
EPEKEGDDAAVPMWELRVEGRLLDDMQPPATGVAPRPAPKRKFSSFFKSLVIELDKDIYG
PDNHLVEWHRTPQTNETDGFQVKRPGDRPVKCTILLLLDYQPMKFKLHPRLAKVLGIAAE
TRPRIIEALWQYIKTHKLQDPQDRDTINNDLFLEQCFGVSKMRFMEIPQRLHQLLQQPDP
LVLNHIIQRPDDGQDKTSACYDIDVELEDPVKQQMASFVHNQNNANDIQVLDQKIFDLVD
QINEMKLRRDFFLRFSNEPSGFIKKWVISQNADLKTLTESSGDGEADRYASTYTTNDADE
GVSRYMYQKIQQKRAELEQSLGIRNN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgcaacagcgaccaccggttcctcagggatcgagatatggtcatccgggtact
cctcagcaagcccgtcgcccaatcaatgcaccattgcctggacaatcaactcagttacaa
ggaaaccgtgttcctcaaccaccaaagaagaaaaaacgttatgcggataaactaattcaa
ccaaaggttcgcgagttagtcccagaatcacaagcttacatggatttgctcgcctttgag
cagaagctggattcaaccatcacaagaaagaaaatcgatgttcaagaagcattaaagaga
ccgcaaaaaattaaaaaacgtttacgaatctatatttcgcacacgttcatcgccgggaaa
gagccagagaaagaaggcgatgacgctgctgtcccaatgtgggaacttcgtgttgaagga
cgccttttagacgacatgcaaccgccagctacaggggtagccccaaggccagctcccaaa
cggaaattcagttctttcttcaaaagcttggtcatagagcttgacaaagacatttacggt
ccggacaatcatcttgtcgagtggcatcgtactccacaaacgaatgaaaccgatggattc
caagtaaaaagacctggagaccgtccagtaaaatgcacaatcctcttgcttctcgattat
caaccaatgaagttcaagcttcatccaagacttgcaaaagttcttggaattgctgcggaa
actcgtccaagaataatcgaagcactttggcaatacataaaaacgcacaagcttcaagat
ccacaagatcgtgataccataaataacgatttattcttggaacagtgcttcggtgtgagc
aaaatgagattcatggaaatcccacaaagacttcaccagcttctccaacagcctgatcca
ctcgttttgaatcacattattcaaaggccagatgatggacaggacaagacttcggcttgt
tacgacatagatgttgaactcgaagacccagtcaagcaacaaatggccagcttcgtacat
aaccaaaacaatgccaatgatattcaagttctcgatcaaaaaatattcgaccttgtggac
caaatcaatgaaatgaaacttcgccgtgacttcttcctacgtttctccaacgaaccaagt
ggtttcataaagaagtgggtcatcagccaaaatgctgacctgaagacgttgactgaatca
agcggagacggagaagccgatcgttatgccagcacatacacaactaatgatgcagatgaa
ggagtttcgagatatatgtatcaaaaaattcaacaaaaacgtgccgaattggagcaaagt
ttgggaattcgcaacaactaa
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