KEGG   Caenorhabditis remanei (nematode): GCK72_009753
Entry
GCK72_009753      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K08331  autophagy-related protein 13
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq04136  Autophagy - other
crq04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:crq00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    GCK72_009753
   04136 Autophagy - other
    GCK72_009753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crq04131]
    GCK72_009753
   03029 Mitochondrial biogenesis [BR:crq03029]
    GCK72_009753
Membrane trafficking [BR:crq04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    GCK72_009753
   Atg1 complex
    GCK72_009753
Mitochondrial biogenesis [BR:crq03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    GCK72_009753
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 78774921
NCBI-ProteinID: XP_053587094
UniProt: A0A6A5H2S1
LinkDB
Position
III:complement(7520527..7522142)
AA seq 421 aa
MVQSLIQSRLGDEVESKCSPYCINTMDWFNMRVDELGEISAYLKSNIKNYPPLSTLTLEF
LLYTPSGQCLPLEAWILTTSEGSEDCTRTELYHEMSTLLRSVIVSARMTPMHRLYVKKQN
QETFVIMYRVFENDISSDMGKGKKTRKIGELTSKFGTISLDLHYRTSMHFEEPEIAPITP
VEDENEMEDGDKTVVDESSLQNKATSECIPIADVKKEKPVEVLNQQQVEEMSREAAPRFI
LGQSTSSEDSRHSDLQNSCDDDHKPSLADLRNHSFPFVNLLQSAYNPANGTKKNASSTSL
NSPKPSEEAPVVEKVAESFRAAKIDEVVFEEDEEEELPIDSMELSEDSFVHFNQLSEFGA
APSLGNELGDYLKQLKTAPDMSDPGDIDICKVDLKTELEKINIQTANFNNFLKHVNSFSD
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggttcaatctctcatccagtcgagattgggtgatgaagttgaatcaaaatgctctcca
tattgtataaatacaatggattggttcaatatgagagtcgatgagcttggtgaaatatct
gcttatctgaaatcgaatatcaaaaactatccaccactgagcacattgacacttgaattt
cttctttatacaccaagtggacaatgtcttccactggaagcatggattttgacgacctct
gaaggttctgaagactgtacaagaactgaattatatcatgaaatgagtacacttcttcga
tctgtaattgtttctgcaagaatgacaccaatgcaccgattgtacgttaagaaacaaaat
caagagacttttgtgattatgtatagagttttcgaaaatgacatttcatcagacatggga
aaaggaaaaaagacaagaaagattggagaactcacttcgaagtttggaacgatcagtcta
gatcttcattatcggacttctatgcatttcgaggagcctgaaattgcaccaatcacgcca
gttgaagatgaaaacgagatggaagatggtgataaaacagtagtagatgaatcatctctt
caaaataaagccacttcggagtgtattccaattgcagatgttaaaaaagaaaagccagtg
gaagtgttgaatcagcaacaagtggaggagatgtctcgagaagccgcacctcgtttcata
ctcggacaatcaacttccagtgaagattcccgccattcggatcttcagaattcatgtgat
gacgatcacaaaccttctttagcagatctccgaaatcactcattcccatttgtaaatctt
ctccaatctgcatataatccagctaatggaacaaagaaaaacgcatcttcgacaagttta
aactctccaaaaccttccgaagaagcgcctgttgttgagaaagtggccgagagttttcgt
gctgcgaaaatcgatgaagttgtattcgaagaggatgaagaggaagaattgccaattgat
tctatggaactcagcgaggattcatttgttcatttcaaccaattatctgagtttggtgca
gcaccaagtctcggaaatgaattgggagactatctgaaacaactgaaaactgcaccagat
atgtcagatcctggagatattgatatctgtaaagtggatttgaagactgagcttgagaaa
attaatatacaaactgccaacttcaacaactttctgaaacacgtcaactcgttctccgat
gagtaa

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