Caenorhabditis remanei (nematode): GCK72_009851
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Entry
GCK72_009851 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_009851
Ion channels [BR:
crq04040
]
Ligand-gated channels
Glutamate (ionotropic)
GCK72_009851
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
DUF5067
Methyltrans_Mon_2nd
Motif
Other DBs
NCBI-GeneID:
9814526
NCBI-ProteinID:
XP_053587143
UniProt:
A0A6A5H3N7
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Position
III:7806057..7809963
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AA seq
961 aa
AA seq
DB search
MKVNELSGAFVASTDTDNDTAHAIIEMLRLAEMTFNALSDVDFDVLLGTRDLPPMEMATM
MWNLNRIICDEMKLGYMLMLAGTNFKNYGIYEDIANHMKMPLIDWEPSKMDYVSSGKHSS
NHPMIFSVAPSAEQLLIDYIQYKGWRDVVYIHDGKNADRTLRTMFSYLHKKSPKYQLFVD
NYVAPSDEEMFKEFLNEFHRRISTQHALKSNDSSEEIDEPIPVNVIVDLEGSYRTRAFLR
ALEESVLVKKEYHYVFSNFDVDENDLSGFHFSLINITIFRIFDKNNKKFLKTRAEFHDVY
RGGFSNTDNIPTAAAFAHDAILVAGKALQIAMNEHGKGIFDKSFVRHQLFNRGKKGLYCR
PHEDQTETRQFETFEHGLKIAESIKKVVLTEQDGTLTGRIQFDKITGRRTNFSAEIVEIK
PGVNSLNSIWERFQWAQDEGFLLGGERYVQEKKKDSSQMRKGILPSKPWKLRFNVVTVLV
KPFVMLKRRNVGEPELKGNDRFEGYCIDLLNLLAKNITGFEYDVFISDGNKYGARQADGS
WDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFME
PLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAF
MQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVDDLANQNK
ILYGVVEGGSTAAFFEDSIVPLYKKMWNFMVSTTQKQMELERQSISNSTSNRIFVSSYAD
GIEKVRTSKGKYAFLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNPLRVSLNL
AILYLSEKGELKKLENKWWYDRGQCDTGTSDGGTSSSLNLSKVAGIFYILLGGMVLSMCT
ALVEFLFRKNKENREKERNRMRNSRQQKPGIIASCERAKQKQHQNRRTKSEEVTTPRSTL
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaatgaactttcaggagcattcgttgcatcaacagatactgataatgatact
gcgcacgcaattattgaaatgctccgactggcggaaatgacattcaacgcgttgtccgat
gtagattttgacgtccttttaggtacaagagaccttccgccaatggaaatggcaactatg
atgtggaatttgaatagaataatttgtgatgaaatgaaacttgggtatatgctgatgctg
gctggtacaaatttcaaaaattacggtatctatgaagatattgcaaatcatatgaagatg
cctcttatcgactgggagccatcaaaaatggattacgtatcaagtgggaaacactcatcc
aatcatccaatgatcttctcggttgctccttcagctgagcaactattgattgattatata
cagtataaaggatggagagatgtcgtttatattcatgacggcaaaaatgcagatagaaca
cttcggacaatgttctcgtatttacacaaaaaatctccgaaatatcagttattcgtggat
aattatgtggctccatcagatgaagaaatgttcaaggagtttctgaatgaattccatcga
agaatatcaactcaacatgcattgaaaagtaatgatagttcggaggaaatcgacgaaccg
atacctgtaaatgttattgtggacctagaaggcagctaccgtactcgagcatttttgaga
gctctcgaggaaagtgtgctcgtgaaaaaagagtatcattatgtattttctaattttgat
gtcgatgaaaacgatttgtctggattccacttctcgctcattaacatcacaatcttccga
atatttgacaagaataataaaaagtttttaaaaacgagagcagaatttcatgatgtctac
cgcggtggtttctcaaacactgataatattccaacagctgctgcattcgcacatgatgcc
attttagttgctggaaaagcattacagatagcaatgaatgaacatggaaaagggattttt
gataaatctttcgttcgccatcaattatttaaccgaggaaagaagggattatactgtaga
ccacacgaagatcaaactgaaacaagacaattcgaaacattcgaacatggactgaagata
gcagaatccattaaaaaagtcgttcttacggaacaagatggaacattgacagggaggatt
caatttgataaaataactggaagacggactaatttctcggctgaaattgtagagataaaa
ccgggagtcaattcattaaacagcatttgggaaagatttcaatgggcacaagacgaagga
tttctacttggtggagagagatatgttcaggaaaaaaagaaagattcaagtcaaatgaga
aagggaattctaccatcgaaaccgtggaaattgcgcttcaatgtggtcactgttctcgtg
aaaccatttgtaatgttgaaaagaagaaatgttggagagccagaactcaaagggaacgat
agatttgaaggatattgtattgatttattgaatttactggccaagaatatcactggattc
gagtatgatgtatttatttctgatggaaataaatatggagcgagacaagcggatggaagt
tgggatggaatgattggatatcttttgaatgagacagctgacgtggcagtggctcctctt
acaataactcaagaaagagaacgagccgtcgatttctcgaaacctttcatgacaactgga
atatcaattatgattaaaaaaccagaaaaacaagaattcaatatcttttcgttcatggaa
ccactcggaatgactatttggattttcactttgagttcttattttggggtttcactgaca
atatttctggtttcctggttctctccatacgaaaaacgaattgaattcaaacgtggcgag
tttactgtaactaatgaattcactctttacaactcactttggttcacattagcagctttc
atgcaacagggaaccgatattctaccgagagcggtttctggaagaatcgcatcttcttgt
tggtggtttttcactttgattattgtttcttcgtatacagctaatcttgcagcattcctc
actcttgaaagaatgacacctccgattgaaagtgtcgacgatttggcgaatcagaataaa
atattatacggagttgttgaaggtggatctactgctgccttcttcgaggattcaattgtg
ccactttacaagaaaatgtggaattttatggtcagtacgacacaaaaacaaatggaatta
gagagacagtcaatatcaaatagcacatcaaatcgaatattcgtcagttcgtatgcagat
ggaatcgagaaagtgaggacaagcaaagggaaatatgcgtttttgctggaagaaacaact
aataattatgaatctggacgaagaccatgtgatacaatgaaagttggacagaacttgaat
actttgggttacggtatcgctacaaaaattggaaatccgttgagagtatccttgaacctg
gccatcctttacctttccgaaaaaggagaattgaagaagttggaaaacaaatggtggtat
gatcgtggtcaatgcgatactggaacatctgatggaggaacaagtagcagtttgaattta
tcgaaagttgctggaatattctacattcttcttggtggaatggtcctctctatgtgcacc
gctcttgtggagttccttttcagaaaaaataaagaaaatcgagagaaagaacgaaataga
atgagaaattctcgacagcagaagcctggaattatcgcttcgtgtgagagggccaaacaa
aaacaacatcagaatcgaaggacgaaaagtgaagaagtcacaacaccgagaagtactttg
ttttaa
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