Caenorhabditis remanei (nematode): GCK72_009875
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Entry
GCK72_009875 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GCK72_009875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_009875
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_009875
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
GCK72_009875
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
GCK72_009875
RSF complex
GCK72_009875
WICH complex
GCK72_009875
B-WICH complex
GCK72_009875
NORC complex
GCK72_009875
BRF complex
GCK72_009875
NuRF complex (fruit fly)
GCK72_009875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HAND
ResIII
DEAD
HDA2-3
SWI2_SNF2
AAA_14
Motif
Other DBs
NCBI-GeneID:
9814509
NCBI-ProteinID:
XP_003113237
UniProt:
E3LST0
A0A6A5H3Q7
LinkDB
All DBs
Position
III:complement(<7911036..>7913978)
Genome browser
AA seq
785 aa
AA seq
DB search
MSDNDSSQGMNDEPMETDSNAGEVEQIEEVGRRMEMDDEPETSDAADSFKRFEKLLQKTE
NFSHCLSSGDAKLASGIPADAKKRGRPSKKNGVDGDHRHRKTEQEEDEELLADAAQGDDL
VIFDKNPFYIENGEMRDYQVRGLNWLVSLQHNNINGILADEMGLGKTLQTISLLGYMKHY
KNQSSPHLVIVPKSTLQNWGNEFKKWCPSIRTVLLIGDEAARNIILRETILTQNFDVCCT
TYEMMLKVKTQFKKLNWKYVIIDEAHRIKNEKSKLSETVRELNSKNRLLITGTPLQNNLH
ELWSLLNFLLPDIFTSSDDFDSWFSSDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLL
PKKEVKVYVGLSKLQREWYTKVLMKDIDVINGAGKVEKARLMNILMHLRKCVNHPYLFDG
AEPGPPYTTDQHLVDNCGKMVVLDKLLVKLKEQGSRVLIFSQFSRMLDLLEDYCWWRKYE
YCRLDGSTAHEDRSQAIEAYNAPNSEKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQS
DLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLG
KGDMISMIRHGAEQVFAAKDSTISDDDIDTILEKAEVKTAELNEKMGKIDENNLRNMTFE
DNTKFTVYNFEGENYKAKQADGMGHFWIEPPKRERKANYQVDLYYKEAMRTGNPAEKQSK
APRPKLPQVFDFQFYPRRLFELLDKEIYHYRKTIGYVVSLDKVIRPSLPNMEREKRLENH
PCSPQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacgactcatctcaaggaatgaacgatgaaccaatggaaaccgattcaaac
gccggcgaggtagaacaaattgaggaagttggacgaagaatggagatggatgacgaacct
gaaacatcagatgcagccgattctttcaaacgattcgaaaaattgctgcaaaaaactgaa
aacttttctcactgcttgtcttcaggagatgccaaacttgcatcgggaatcccagccgac
gccaaaaagcgcggcaggccttcaaaaaagaacggagtggatggagaccacagacaccgg
aaaactgaacaagaggaagatgaagaactcctcgcagatgctgctcaaggagatgatctc
gtgattttcgacaagaatccgttttatattgaaaatggagaaatgagagactatcaggtt
cgcggtctcaattggctagtttcactccaacataacaatattaatggaattttggctgat
gaaatgggtcttggaaaaacacttcaaactatttctctactcggttatatgaaacattat
aagaatcagtcatcacctcatcttgttattgtgcccaagtcaactcttcaaaactggggc
aatgagttcaagaaatggtgtccatcaatcagaaccgttctccttattggagatgaagcc
gctagaaatataatcttacgagaaacgattcttactcaaaatttcgacgtttgttgtaca
acttacgaaatgatgctcaaagtcaagactcagttcaaaaagctcaattggaagtacgtg
atcatcgacgaagcgcatcgtatcaaaaacgagaagagcaagctgtctgaaactgtacga
gagctcaattccaaaaatcgacttctcataacaggaactccgcttcaaaacaacttgcat
gaactctggtctcttttgaactttcttttgcctgacattttcacttcttcggatgacttc
gattcatggttctccagcgatgcaatgagtggaaacactgatttggtacagcgccttcac
aaggttcttcaaccgttccttcttcgtcgtatcaaatcagatgttgagaagtcattgttg
ccaaagaaagaggttaaagtttatgttggtctttcgaagcttcaaagagagtggtacacg
aaggttctcatgaaagatattgatgttatcaatggagctggaaaagttgagaaagctcgc
cttatgaatatcttgatgcatcttcgaaaatgcgtcaatcacccgtatcttttcgacggt
gctgaacctggaccaccttacaccacagaccagcatctcgttgacaattgcggaaagatg
gttgtcctcgacaagttgcttgttaaactcaaagaacagggttcacgagttcttattttc
tctcagttctctcgaatgcttgatttactcgaggactattgctggtggcgaaagtatgaa
tactgtcgtcttgatgggtcaactgcacacgaagaccgctcacaagcaattgaagcatat
aatgctccaaactctgaaaagttcattttcatgttaaccactcgtgccggaggccttgga
atcaatttggctactgctgatgtcgtcatcatttatgactctgactggaaccctcaatct
gatcttcaggctatggatagagctcatcgtatcggtcaaaagaaacaagtcagagttttc
cgtttgattactgagaacacagtcgatgagcgtattattgaaaaggccgaagcaaaactt
cgtctcgataacattgtcattcaacaaggacgtatgtcggaagctcaaaaaactcttgga
aagggagatatgatcagcatgattagacatggagcggaacaggtatttgctgctaaagac
tctacaatcagcgatgacgatattgacaccattctcgagaaagcggaagtgaagacggcg
gagttgaacgagaaaatggggaaaattgatgaaaacaacctgcgaaacatgacgttcgaa
gacaatacaaaatttactgtttataacttcgaaggggagaactacaaagccaagcaggct
gatggtatggggcatttttggattgagccaccaaaaagagagcgtaaagcaaattaccag
gtggatctctactacaaagaagccatgagaactggaaatccggcggaaaagcaatcaaag
gccccgcgcccaaaactcccacaagttttcgatttccaattctatccacgccgtctgttt
gagctattggacaaagaaatttatcattatcgcaagacaattggatatgtggtaagttta
gacaaagtaattaggccaagtctcccaaatatggagcgggagaaacgattggagaatcat
ccatgtagtccacaataa
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integrated database retrieval system
