Caenorhabditis remanei (nematode): GCK72_009934
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Entry
GCK72_009934 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04080
Neuroactive ligand-receptor interaction
crq04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GCK72_009934
04082 Neuroactive ligand signaling
GCK72_009934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_009934
Ion channels [BR:
crq04040
]
Ligand-gated channels
GABA-A
GCK72_009934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CagL
Motif
Other DBs
NCBI-GeneID:
9806442
NCBI-ProteinID:
XP_053587183
UniProt:
A0A6A5H1X7
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Position
III:complement(8169535..8173546)
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AA seq
443 aa
AA seq
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MNVFRDQSNENLENNVTRLLDKLIASHDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMD
YTLDLYLRQIWKDPRLAWESDVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSF
LRIDSHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVT
IDENVHLAHFTIGEHYHIERTISLSTGNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVIS
WVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASL
LEYAAIGYLMKRNRSVPAASPVQYYETEEFFEVQCHPKYVKGAVNYCDGVLKREASRKKS
RNRRDSSMKNYQNNNIHHRPSDGHVDQRIPLLSMVPMPPIPFKPQNGAWGKVRPAQVDLF
SRFAFPIFFVIFHIIYWTYYINQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttcagggatcaaagcaatgagaatttggagaacaatgtgacacggttattg
gataaattgatagcaagtcatgatagaaggattcggcccaattatggaggacctccaatt
gaagtgaatatcactgcacacgtgacaacaatcagtgcagtttcagaagtttctatggat
tacacattggatttatatcttcgtcaaatctggaaagatcctcggttagcatgggaatca
gatgttgaagattcactcacaatcggaattgatatggtcaagactatctggactcctgat
acatttttcccgaatgagaagaagtcattcttccatgaagcgacgtctcacaactcgttt
cttcgaattgacagtcatggaaatgtattgagaagtattcgattaacagtcactgcaaac
tgtccaatgagtctgcatactttcccattggatcgtcaagaatgtgcactcgaggtcgag
agttatggatactcaacgaaggatatcatttatcattggcatggaacaaatgcagttaca
attgatgaaaatgttcatttagcgcattttacaatcggagaacattatcatatcgagagg
acaattagtctttcgactggaaattattcaagattgactgcttatttcatgttcaaacga
aatattggtttctatttgattcagatctacttcccttcatctctgattgttgtcatttct
tgggtatcattctggttaaatcgagaagccgtccaagcaagagttgcaatcggagtaaca
actgtgttaacaatgacaactctcatgacaagtacaaatgcatctcttccaaaagtgtca
tatgtcaagtcattggatgtgttcctcggagtttgctttttcattgtgtttgcatctctt
ctggaatacgctgcgatcggatatttgatgaaaagaaatcgaagtgttcctgctgcttca
ccggttcaatattatgaaacagaagagtttttcgaagttcaatgtcatccgaaatatgta
aaaggggctgttaactattgtgatggcgtgctgaaaagagaagcaagtcgaaagaaaagc
agaaatcgtcgagatagttccatgaagaattaccagaacaataacattcatcatcgtcca
tcagatggtcatgtcgatcaaaggattccacttctttcaatggttccgatgcctccgatt
ccattcaaacctcagaatggagcatggggaaaagtgagaccggctcaggtcgacctcttc
tctcgttttgcttttccaatattttttgtaatattccatatcatctactggacatattac
atcaatcaatga
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