Caenorhabditis remanei (nematode): GCK72_009941
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Entry
GCK72_009941 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03030
DNA replication
crq03410
Base excision repair
crq03420
Nucleotide excision repair
crq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCK72_009941
03410 Base excision repair
GCK72_009941
03420 Nucleotide excision repair
GCK72_009941
03430 Mismatch repair
GCK72_009941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crq03032
]
GCK72_009941
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_009941
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_009941
DNA replication proteins [BR:
crq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GCK72_009941
DNA Replication Termination Factors
ELG1-RFC complex
GCK72_009941
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GCK72_009941
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GCK72_009941
Check point factors
HRAD17(Rad24)-RFC complex
GCK72_009941
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_5
Rad17
RuvB_N
AAA_22
ResIII
AAA_24
AAA_11
AAA_16
Mg_chelatase
DEAD
AAA_14
IstB_IS21
ABC_tran
bpMoxR
AAA_3
nSTAND3
AAA_7
RNA_helicase
BBIP10
MCM
Rep_fac_C
AAA_assoc_2
AAA_lid_RFC1
DUF815
AAA_2
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
9807524
NCBI-ProteinID:
XP_053587187
UniProt:
A0A6A5H3W4
LinkDB
All DBs
Position
III:complement(<8204738..>8206054)
Genome browser
AA seq
334 aa
AA seq
DB search
MAEQIEVDNKKSKVLTWTEKYRPKTLDDIAHQDEVVTMLKGALQGKDLPHLLFYGPPGTG
KTSTALAFCRQLFPRNIFQDRVLDLNASDERGISVVRQKIQSFSKTSLSTNCKEDVLKLK
IIILDEVDAMTREAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSLPSE
VQVQRLRTICDAEETPMSNDELMQVMEYAEGDLRRAVCTLQSLAPILRSGDENARNCYLR
GSSDSALISNLCKSVRVSNVPQIISLTKSITKSCTGVAFMRHCFQQMLQENIINDENIAV
MGKLVATCEKRILDGCDLENNLLNFLLTLRETIQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaaatagaagtcgataacaaaaaaagcaaagtactcacatggactgaaaaa
tacagaccaaagacgcttgacgatatcgctcatcaggatgaagtagtcacaatgctgaaa
ggagctcttcaaggaaaagacttgccacaccttttgttttacggaccaccgggaactggt
aaaacgtcaactgcgctggccttctgtcgtcaacttttcccaagaaacatcttccaggac
cgcgtgctcgacttgaacgcttcggatgaacgtggaatttcggttgttcgacagaaaatt
caatcattctctaaaacatcgctgagtacaaattgcaaagaagacgttctgaaactgaag
attatcattcttgacgaagtcgacgctatgacacgagaagcacaagcagcaatgcgcaga
gttattgaagatttctctaaaactacgcgattcattctaatttgtaattatgtttctcgt
ctcatccctcccgttgttagtcgttgtgcaaagttcagattcaagtcactaccatcagaa
gttcaagtgcagagattgcgaacaatttgtgatgctgaagaaactccaatgagcaacgat
gagctcatgcaagtgatggagtatgcggaaggtgatttgagaagagctgtctgcacattg
caatcattggcgccaattctgagaagtggagatgaaaatgcacgaaactgctacctccgt
ggatcgtccgattctgctttgatttccaatctatgtaaatcagttcgagtctctaatgtg
cctcaaattatctcgttgactaaaagtatcacgaaatcgtgtactggggtcgcattcatg
cgtcattgcttccagcaaatgctccaagaaaacattatcaacgatgaaaatattgcagtg
atgggaaaactagttgcaacatgcgaaaagcgaattcttgatgggtgtgatctggagaac
aatcttctcaacttcttgcttactctccgtgagacaattcagtga
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