Caenorhabditis remanei (nematode): GCK72_009975 Help Entry GCK72_009975      CDS       T09085                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism crq  Caenorhabditis remanei (nematode) Pathway crq03020   RNA polymerase crq03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:crq00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     GCK72_009975   09124 Replication and repair    03420 Nucleotide excision repair     GCK72_009975  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:crq03021]     GCK72_009975    03400 DNA repair and recombination proteins [BR:crq03400]     GCK72_009975 Enzymes [BR:crq01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      GCK72_009975 Transcription machinery [BR:crq03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      GCK72_009975 DNA repair and recombination proteins [BR:crq03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       GCK72_009975 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  9807295 NCBI-ProteinID:  XP_053587204 UniProt:  A0A6A5H3Z1 LinkDB All DBs Position III:complement(8321315..8325636) Genome browser AA seq 1170 aa AA seqDB search MIYEKKVMYEEDDDMENVPMEGDYNDETDEISAEAWQEACWVVISAYFDEKGLVRQQLDS FDEFVQMNVQRIVEDSPPVELQSENQHLGNDMENPAKFSLKFNQIYLSKPTHWEKDGAPM PMMPNEARLRNLTYASPLYVDITKVVTRDDSVNEKLYEKVFVGKVPVMLRSSYCMLSNMT DRDLTELNECPLDPGGYFVINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTECRSCLEN SSRPTSTMWVNMLARGGGGGKKTAMGQRIIGILPYIKQEIPIMIVFRALGFVSDRDILGH IIYDFDDPEMMEMVKPSLDEAFVIQEQNVALNFIGARGAKPGVTREQRIKYAREILQKEL LPHVGVSEHCETKKAFFIGYMVHRLLLAALGRRELDDRDHIGNKRLDLAGPLLAFLFRAL FRNLLKEMRMTAQKYINKNDDFALDVCVKTSTITRGLAYSLATGNWGDQKKAHQSRAGVS QVLNRLTYTATLSHLRRANSPIGREGKLAKPRQLHNTQWGMVCPAETPEGQAVGLVKNLA LMAYISVGSLPEPILEFLEEWSMENLEEVSPSAIADATKIFVNGAWVGIHREPDQLMTTL KKLRRQMDIIVSEVSMVRDIRDREIRIYTDAGRVCRPLLIVEDQKLALRKRHIDQLKDID EANKYTWSDLVGGGVVELIDSMEEETSMIAMMPEDLRSGGYCDTHTHCEIHPAMILGVCA SIIPFPDHNQSPRNTYQSAMGKQAMGVYTTNFHVRMDTLAHVLYYPQKPLVTTRSMEYLR FNELPAGINAIVAILSYSGYNQEDSVIMNNSAIDRGLFRSVFYRSYRDNEANLDNANEEL IEKPTREKCSGMRHSLYDKLDEDGIISPGMRVSGDDVIIGKTVALPDIDDDLDATGKKYP KRDASTFLRSSETGIVDQVMLSLNNDGNKFVKIRMRSVRLPQIGDKFASRHGQKGTMGIM YRQEDMPFTAEGLTPDIIINPHAVPSRMTIGHLIECLQGKLSANKGEIGDATPFNDTVNV QKISGLLCEYGYHLRGNEVMYNGHTGKKLTTQIFFGPTYYQRLKHMVDDKIHSRARGPIQ MMNRQPMEGRARDGGLRFGEMERDCQISHGATQFLRERLFEACRNKTQVSAVRIPYACKL LFQELMSMSIAPRLMVKPQQPKRAKHQTEA NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atgatatacgaaaagaaagtgatgtacgaagaagatgatgacatggagaatgttccgatg gaaggggactataacgatgagacagacgagatcagtgctgaagcgtggcaagaggcgtgt tgggttgtaatcagtgcttatttcgatgagaagggactcgttcgacaacaacttgactcg ttcgatgaatttgttcaaatgaacgttcaaagaattgtagaagattcaccaccggtcgaa cttcaatctgaaaaccaacatctcggaaatgatatggaaaatccggccaaattctcattg aaattcaatcaaatctatctatccaaaccgactcattgggagaaagacggagctccaatg cctatgatgcctaatgaagcacgtcttcggaacctgacgtatgcatcaccactttacgtt gatatcacgaaagtcgtgacacgagacgattcagtgaatgagaaactttacgagaaagtt ttcgttggaaaagtaccggtcatgctgcgctccagttattgtatgttatccaatatgaca gatcgtgatctaacagaacttaacgagtgtccgctcgatccgggaggctactttgttatc aatggatcagagaaagtactcattgctcaagagaaaatggctacgaacacagtttacgtt ttctccatgaaagacggaaaatatgcattcaaaacggagtgtcgctcatgtttagaaaat tcttcgagaccaacttctacaatgtgggtcaatatgcttgccagaggaggaggtggtgga aagaaaactgcgatgggacaaagaattattggaattttgccatacatcaaacaggaaatt cctatcatgatcgtgtttcgtgcattaggattcgtatcagatcgtgatatcctcggacat attatctatgatttcgatgatccggaaatgatggaaatggtcaaaccttcattggatgaa gcatttgtcattcaggaacaaaacgttgctctcaattttattggtgcacgcggagccaaa cctggagttaccagagaacaaagaatcaaatatgctcgcgaaattctccaaaaagaattg ttaccacacgttggtgtttcggaacattgtgaaactaaaaaggctttcttcattggatat atggttcatcgtcttctattagccgccctcggtcgtcgcgagcttgacgatcgagatcac attggaaataaaagacttgacttagccggaccacttcttgctttcctcttccgtgccctt ttcagaaacttactcaaggagatgagaatgactgcccaaaagtatatcaacaaaaacgat gactttgcattggatgtgtgtgttaaaacatcgactatcacccgaggactagcatattca ttggctactggaaactggggggatcagaaaaaagctcatcagtccagagctggtgtatct caagtgctcaatcgtctcacatacacagccacactttctcatttgcgtcgtgccaactct ccaatcggtagagaaggaaaactagccaagccacgtcaattgcacaatactcaatgggga atggtttgtcctgctgaaactccagaaggacaagctgtgggcttagtgaaaaacttggct ttgatggcttatatttctgtcggatctttaccagaaccaattttggagttcttggaagaa tggtctatggagaatcttgaagaagtatcaccgtctgcaattgcagatgcgacgaaaatc tttgtcaatggtgcatgggtgggaattcatcgagaaccagatcagttgatgacgactctg aaaaagctacgtcgtcaaatggatattattgtttctgaagtttctatggttcgtgatatt cgagacagagagattcgtatctatactgatgctggaagagtttgtcgaccactgctcatc gttgaagatcaaaagttggctttgagaaagaggcatattgaccagttgaaggatattgat gaagcaaataaatatacatggtctgatctggttggtggtggagtggtagagttgatcgat tcaatggaagaagaaacatcaatgattgcaatgatgccagaagatttacgaagtggtggt tattgtgatactcacacacattgcgaaattcacccagctatgattctgggtgtatgtgca tccatcattcccttcccagatcacaatcagtctccacgtaatacataccagagtgctatg ggtaaacaagctatgggagtttacacgacaaatttccatgttcgaatggatactcttgca catgtcctttattatccacaaaaaccactcgtcaccaccagatctatggaatatcttcgt ttcaatgaactgccagctggtatcaacgctattgtggccattctttcgtattcaggatac aatcaggaagactccgtaattatgaacaactcagccattgatagaggtctttttcgctct gtattctatcggtcttatcgtgacaacgaggcaaatcttgataatgctaatgaagagctt atcgagaaaccgacgcgggagaagtgctctggaatgcgtcactctttgtacgacaaactc gatgaagatggtatcatttcacccggaatgcgtgtttctggagatgatgtcatcatcgga aaaactgttgctctacccgacattgatgatgatttggatgcaacaggaaagaaatatccg aaaagagatgcttcaacatttttgagaagttccgagacaggaattgttgatcaggttatg ctctcacttaataacgatggcaacaagtttgttaaaattcgaatgcgatctgttcgactc cctcaaattggagacaaatttgcatctcgtcacggtcagaaaggtacaatgggtatcatg tatcggcaagaagatatgcctttcactgctgaaggacttactcctgatatcatcattaac cctcatgcggtaccgtctcgtatgacaattggtcacttgattgaatgtcttcagggaaaa ctatctgccaacaaaggtgaaatcggtgatgccacgccgttcaacgacacagttaacgta cagaaaatctctggtctcctttgtgagtatggatatcatctccgtggtaacgaagtgatg tacaatggtcacaccggaaaaaaattgactacacaaattttcttcggtccaacttattat cagcgcctcaagcatatggtcgatgacaagattcactcgcgtgcacgcggcccaattcag atgatgaaccgtcaacctatggaaggaagagctcgtgatggaggtcttcgtttcggagaa atggaacgtgattgtcaaatttcacacggagcaactcagttccttcgggaacgtctcttc gaagcgtgccgcaacaaaacccaagtgtcagcggttcgtattccatacgcttgcaagctc cttttccaagaactcatgtccatgtctatcgcaccgagactcatggtcaaacctcaacaa ccaaagcgtgcaaaacatcagacagaagcttga

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