KEGG   Caenorhabditis remanei (nematode): GCK72_009983
Entry
GCK72_009983      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03020  RNA polymerase
crq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GCK72_009983
  09124 Replication and repair
   03420 Nucleotide excision repair
    GCK72_009983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_009983
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_009983
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     GCK72_009983
  RNA polymerase III system
   RNA polymerase III
     GCK72_009983
  RNA polymerase I system
   RNA polymerase I
     GCK72_009983
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GCK72_009983
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 9807322
NCBI-ProteinID: XP_003105956
UniProt: E3MCM0
LinkDB
Position
III:8349638..8350270
AA seq 148 aa
MAGIIFDDMFKVKSVDPDGKKFDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKFRLVL
ATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDTGTDGGKLAAYASFGGLL
MRLKGEAINLHGFEVDMNLYLLMKKTDF
NT seq 447 nt   +upstreamnt  +downstreamnt
atggcaggaattatttttgatgacatgttcaaggtgaaaagtgtagatccagacggaaag
aaatttgacagagtgtcccgatacttctgtgacgctgaatcattcaaaatggagctaatc
atcgatatcaactcacaaatttatccactgaagcaaaacgataaattccgtcttgttctc
gccacaacgctacgcgaagacggtcttgctgacgaaggagagtacgatccgaaggcagag
tacccacgcatcaagcagtacgagtatgtgatgtatggaaaagtgtaccgtttggaagat
gacgacactggaactgatggcggaaaactcgcagcgtatgcttcttttggaggtcttctc
atgcgactcaagggagaggcaattaatttgcacggattcgaagttgacatgaacctctat
ttgctcatgaaaaagactgatttctga

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