KEGG   Caenorhabditis remanei (nematode): GCK72_010075
Entry
GCK72_010075      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K15361  WD repeat-containing protein 48
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    GCK72_010075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crq03400]
    GCK72_010075
DNA repair and recombination proteins [BR:crq03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     GCK72_010075
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EML_2 NBCH_WD40 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WDR54 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_RIG_2nd RAWUL Beta-prop_SCAP
Other DBs
NCBI-GeneID: 9807298
NCBI-ProteinID: XP_053587252
UniProt: A0A6A5H2A2
LinkDB
Position
III:complement(8634247..8637092)
AA seq 681 aa
MSSVSNASQTGSKKKLSFIVRDEQEPSHRSAVSAMQYDAQHGRLFTGGSDTIIRTWSVPQ
HKDAFSARGGVRSPGKNSPVQYQGSLEQHTDWVNDMILCGNGKILISASNDTTVKAWSIE
RDNKHGYLDCFRSHKDYVSCLAYAPNVEKVVSASFDRNIFVYDINANFKTVNNLLGCKDS
IYSLATTPNLSLILGSGTEKLIRIFDPRTNEKPMKMRGHTDNVRALVVNDDGTRALSAGS
DATIRLWDIGSQRCISTCIAHQEGVWTLQVDSSFSTVYSAGKDRWVLKTPVNELPKSQLL
FQEEAPVKKLLLSEKENPSSIWVGTWKSHIKRWSLRSSAQLSIGGDDEGPTSSSHYSTST
PAPSSPPVSVSLRVRDQKPQQTTPELVIPGAASINKHKTLNDKRHVLTRDTDENVALYDV
LAAKKVKDYGKRSFDEVFDENSKTIFIPSWFVVDSKSGMLQITLDELDVFSSWLSTKDAG
FDDNDRETKVNYGGMMLRSLFERWPPCKAACMEAGEMDEVQKATSHFFSLPEHTPFIVCE
GNGRPLFRLLVGDAGKEFEANELSQVVPPWVIDAIERSQLPKFNKMPFYLLPHPSTNPKQ
PKKDRLSATEMLQVKKVMEHVYDKVLSNSDASSIPISQIHTKIEMYCNEQKLEPEMDLRT
VKHFFWKQSGELLLYYKPIKN
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgtccagcgtatcaaatgccagtcaaactggttccaagaaaaaactttcattcatagtt
cgagatgagcaagaaccatcgcatcgttcggcagtaagtgctatgcagtatgatgcacaa
catggtcgtcttttcacgggtggtagtgacactattatcaggacttggtctgtaccacaa
cacaaagacgcattctccgctcgaggcggagttcgatcccctggaaaaaactccccagtc
cagtatcaaggatcattggaacagcatacggattgggtcaatgatatgattctttgcgga
aatggaaaaatattaatatccgcttcgaacgatacaacggtaaaggcttggagtattgaa
cgagataataaacacggatatcttgactgttttagatcacataaggactacgtgagctgt
ctggcttatgctccaaatgttgaaaaagtggtcagcgctagcttcgatagaaatattttt
gtgtatgacattaatgcaaatttcaaaactgtaaataacttgcttggatgtaaggatagc
atctattcactcgctacaactcccaacctttctttgattctagggagtggaactgagaag
ttaattcgaatatttgatccacgaactaatgaaaaaccaatgaaaatgcgtggccacacc
gataatgtccgcgctcttgtagtaaatgatgatggaacaagagcactgtctgctggatct
gatgcaactatcagattatgggatattggttcgcagcgatgcatttctacttgtattgct
catcaagaaggagtttggactcttcaagtcgactcttcgttctcgactgtgtacagtgct
ggtaaagacagatgggttttgaaaactcctgtcaatgaactcccaaaaagccaactactg
ttccaagaagaagcaccagtgaagaagttattgctaagtgagaaagagaatccatcttct
atttgggtcggaacatggaagtctcatatcaagagatggtcattgcgttcatcagctcaa
ctttccattggaggagacgatgaaggcccaacttcatcatctcattattctacctctaca
cctgctccatcatcacctccagttagtgtttcgctcagagtaagggaccaaaaacctcaa
cagactacacctgaattagtgattcctggtgccgcctcaataaataagcacaaaactctg
aatgacaaacgacatgttttaacaagagacactgatgaaaatgtagcattgtacgatgtc
ctggcggctaaaaaggtaaaagactacggaaaacgatcattcgatgaagtattcgatgaa
aattcaaaaactatttttattccaagttggtttgttgttgactctaagagtgggatgctt
caaataaccttggacgaacttgacgttttttcttcatggctttcaactaaagatgctggt
ttcgatgacaacgacagagaaacgaaagtgaattatggaggaatgatgcttcgctcattg
ttcgaacgttggccgccatgcaaagcagcatgtatggaagccggtgaaatggatgaagtc
cagaaagctacatcacatttcttttcacttccagagcatacaccgttcattgtttgcgaa
gggaatggtcgtccacttttccgcctacttgtcggcgatgctggaaaagagtttgaagcg
aatgaactttcacaagttgttcccccttgggtaattgacgccatagagcgaagtcagctc
cccaaattcaacaaaatgcctttctatctgcttccccatccttctacaaatcctaagcag
ccgaaaaaagaccgtctgtcggccacagagatgttgcaagttaaaaaagtaatggagcac
gtttatgacaaagttcttagcaacagtgatgcgagctcaattccgattagtcaaattcat
acgaaaattgaaatgtactgcaatgaacaaaagttggaacctgaaatggatttgcggaca
gtgaaacacttcttctggaaacaaagtggagaactgttgctttattataaaccaatcaaa
aactga

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