Caenorhabditis remanei (nematode): GCK72_010106
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Entry
GCK72_010106 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03013
Nucleocytoplasmic transport
crq03015
mRNA surveillance pathway
crq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GCK72_010106
09122 Translation
03013 Nucleocytoplasmic transport
GCK72_010106
03015 mRNA surveillance pathway
GCK72_010106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_010106
03041 Spliceosome [BR:
crq03041
]
GCK72_010106
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GCK72_010106
Spliceosome [BR:
crq03041
]
Complex C
Other components
EJC/TREX
GCK72_010106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
9807360
NCBI-ProteinID:
XP_003106032
UniProt:
E3MD05
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All DBs
Position
III:complement(8775923..8776540)
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AA seq
142 aa
AA seq
DB search
MGDNDVEMEDVVANAEKSKGRGLAQARNREKIIYDVVDEESTATSGGPQRSVEGWIVFVT
NIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIEQSNETD
LLGQNVKVDWCFIKGKKSSGRR
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataacgacgttgagatggaagacgtagtagcaaacgcagagaagtcaaagggt
cgaggacttgcacaggctcgtaatcgtgagaagattatttacgatgtggttgatgaggag
tcgactgctaccagtggtggcccacagagatctgtcgaaggatggattgtgttcgtcaca
aacattcacgaagaggcaaccgaggacgacgtgcacgacaaattctccgagtatggaaaa
atcaaaaacattcatcttaaccttgatagacgaactggatttttgaaaggatacgcactc
gttgagtacgaaacacagaaggaagcaaatgaagcaatcgaacagagcaacgaaacagat
ctgcttggtcagaacgtcaaagtggactggtgtttcatcaagggaaagaaatcatcagga
cgacgttaa
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