KEGG   Caenorhabditis remanei (nematode): GCK72_010106
Entry
GCK72_010106      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03013  Nucleocytoplasmic transport
crq03015  mRNA surveillance pathway
crq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GCK72_010106
  09122 Translation
   03013 Nucleocytoplasmic transport
    GCK72_010106
   03015 mRNA surveillance pathway
    GCK72_010106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crq03019]
    GCK72_010106
   03041 Spliceosome [BR:crq03041]
    GCK72_010106
Messenger RNA biogenesis [BR:crq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GCK72_010106
Spliceosome [BR:crq03041]
 Complex C
  Other components
   EJC/TREX
    GCK72_010106
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 9807360
NCBI-ProteinID: XP_003106032
UniProt: E3MD05
LinkDB
Position
III:complement(8775923..8776540)
AA seq 142 aa
MGDNDVEMEDVVANAEKSKGRGLAQARNREKIIYDVVDEESTATSGGPQRSVEGWIVFVT
NIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIEQSNETD
LLGQNVKVDWCFIKGKKSSGRR
NT seq 429 nt   +upstreamnt  +downstreamnt
atgggtgataacgacgttgagatggaagacgtagtagcaaacgcagagaagtcaaagggt
cgaggacttgcacaggctcgtaatcgtgagaagattatttacgatgtggttgatgaggag
tcgactgctaccagtggtggcccacagagatctgtcgaaggatggattgtgttcgtcaca
aacattcacgaagaggcaaccgaggacgacgtgcacgacaaattctccgagtatggaaaa
atcaaaaacattcatcttaaccttgatagacgaactggatttttgaaaggatacgcactc
gttgagtacgaaacacagaaggaagcaaatgaagcaatcgaacagagcaacgaaacagat
ctgcttggtcagaacgtcaaagtggactggtgtttcatcaagggaaagaaatcatcagga
cgacgttaa

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