Caenorhabditis remanei (nematode): GCK72_010107
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Entry
GCK72_010107 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03082
ATP-dependent chromatin remodeling
crq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GCK72_010107
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GCK72_010107
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crq01009
]
GCK72_010107
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_010107
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_010107
Protein phosphatases and associated proteins [BR:
crq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GCK72_010107
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GCK72_010107
SWI/SNF complex
GCK72_010107
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
GCK72_010107
PBAF complex
GCK72_010107
SWI/SNF complex
GCK72_010107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
TdIF1_2nd
Motif
Other DBs
NCBI-GeneID:
9807469
NCBI-ProteinID:
XP_003105940
UniProt:
E3MD06
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All DBs
Position
III:complement(8776753..8778075)
Genome browser
AA seq
381 aa
AA seq
DB search
MSSSTKTLSQTYGPRPQSFSLDETGEKYYIGSEIGAYLRLHRGTLYKKYPLLWRKVATSD
DKDKLKQIAMSNAFLHTNIMLLKAHEVDELLDGSEEKYRAAGAAPSTPRTEGVSRTVTKT
PAAAWGGQQVTSGSHHLESVPCSCPIAHSRGRMKHRELVYSAEDLEMSKKVMENAEEGED
LVPIRLDMELEGIKLRDTFCFNRNEKMVTPEMIAEIMCEDLDLPVAVFQPAITAAINQQL
EASTEAPPLDPNTCDQRAVLKLNINVGNQSLVDQFEWDMSDPQNSPEEFARNICKELGLG
GEFMSGIAYSIRGQLQWNQRTYAFSESPLATVDCPFRTATEVESWGPFLETLTDAEIEKK
MRDQDRNTRRMRRLVGGGFNY
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagtactaagacactttctcaaacatatggcccacgcccgcagagtttcagt
ctcgacgagactggcgagaaatactacatcggttctgaaatcggtgcctacttgcgacta
catcgtggaacgctgtacaaaaaatatccattgctttggagaaaagtagctacttccgat
gacaaagacaaactgaaacaaatagcgatgtcaaatgcttttcttcacaccaatatcatg
cttttaaaagctcatgaagttgatgaacttttggacgggtccgaagaaaaatatcgtgct
gctggagctgcgccgtcaactcctcgaactgaaggagtttctcgaacagtaacgaaaact
cctgctgccgcttggggtggacaacaagttacgagtggttctcatcatctggaatcagtt
ccatgttcctgtccaattgctcactcacgcggccgcatgaagcatcgtgagctggtctac
tccgcagaagatttggaaatgtcgaaaaaagtcatggagaacgccgaagaaggggaagat
ctcgtgcccattcggttagatatggaattggagggaataaaacttcgcgacactttctgt
ttcaatagaaacgaaaaaatggtcactccagaaatgatagctgaaattatgtgcgaagac
cttgaccttccggttgccgtcttccagccggcgatcacagctgcaatcaatcagcagctt
gaagcatctacggaggctcctccgcttgatcccaacacgtgcgatcaaagagcagtactg
aaattgaatatcaatgttggaaatcaaagtcttgtagatcagtttgaatgggacatgtca
gatccacaaaatagtcccgaagagtttgcacggaacatttgtaaagagctcggtcttggt
ggtgaattcatgtctggaattgcgtattctatccgtggacagttacaatggaaccaaaga
acgtatgcgttttcggaaagtcctcttgccactgttgactgtcctttcaggacagcaaca
gaagtggagtcgtggggtccattccttgaaactttgactgacgctgaaatcgaaaagaaa
atgcgcgaccaagacagaaacaccagaagaatgcgccgccttgtcggtggaggattcaat
tattaa
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