Caenorhabditis remanei (nematode): GCK72_010186
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Entry
GCK72_010186 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCK72_010186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_010186
Enzymes [BR:
crq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GCK72_010186
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCK72_010186
Prokaryotic type
GCK72_010186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
9802625
NCBI-ProteinID:
XP_003104167
UniProt:
E3MI29
LinkDB
All DBs
Position
III:9106410..9107392
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AA seq
291 aa
AA seq
DB search
MSKTVKIPDMFLKAAAASKRKSANNTEKLPEKPSKEIKENETVKKMKLEELNTEATPAPL
KKELSLKSLLQSESWSKLLEEEFKKGYISKIEKFLNDEEIKGKQVFPPTSQIFTTFNILP
FDEISVVVIGQDPYHDDNQAHGLSFSVQKGVKPPPSLKNIFKELESDIDGFKRPDHGNLS
GWARQGVFMLNATLTVRAHEANSHAKIGWQTFTDTVIRIISRNSEKPIVFLLWGGFAHKK
EELIDSKKHVIIKTAHPSPLSARKWWGCKCFSKCNAELEHSGRNPINWSDL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaactgttaaaattccggatatgttcttgaaggcggctgctgcctccaaacga
aagtctgcaaataacacagaaaaattgccagaaaaaccgtcaaaggaaataaaagaaaat
gaaactgtcaaaaagatgaaactcgaagaattaaatacggaagcaaccccagcacctctc
aaaaaagaactcagtttgaaatcattgctacaaagcgaatcgtggtcaaaactcctggag
gaagagttcaaaaaaggttacatctcgaaaattgagaaatttttgaatgatgaagaaatc
aaaggaaagcaagtatttccgccaacgtctcaaatcttcacaacattcaacattctacct
tttgatgaaattagtgttgtagtcattggacaagacccataccatgatgataatcaagct
catggattatcattcagtgtgcagaaaggagtgaagccaccgccatcgctgaaaaatatt
ttcaaggaactcgagtcagatattgatggattcaagaggccagatcatggcaatctgtca
ggatgggcccgtcaaggagttttcatgctgaatgcaactttaacagttcgtgctcatgag
gcgaattcccatgccaaaatcggatggcagacttttacggacactgtgattcgaatcatt
tcaagaaattcggagaagccgattgtgttcttattgtggggagggttcgcacataaaaaa
gaagaattgattgactcaaagaagcatgtaattatcaagactgctcatccatctccactc
agtgcacgcaaatggtggggttgtaaatgtttttcaaaatgcaatgcagaacttgaacac
tctggtagaaacccaataaactggagtgatttgtaa
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