Caenorhabditis remanei (nematode): GCK72_010314
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Entry
GCK72_010314 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
GCK72_010314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_010314
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
GCK72_010314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
MMS19_N
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
9825996
NCBI-ProteinID:
XP_003110793
UniProt:
E3LYN2
A0A6A5H6P8
LinkDB
All DBs
Position
III:9575526..9577138
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AA seq
368 aa
AA seq
DB search
MVTKKKARKNEDFKKVKLKVGKKLKKTTTTDTTIKAKRVVLASQLEEKVETDVNPLSFRG
LTLEELCKQMGHFNSKVKMNAIQGLKQILTSRPDLVNIHLRLLVPCVAVHVSDATFEPQT
RQNLLNLYKILCTASTSAMSAHITLFLAHVLRALTNIVTEVRHLALNTLSILLDRYPSLC
CNHADLFPCFINYLGSSKRLAWNKPGLIDTTLNFINVYDMNRERKVIITNVEVNYETGTV
EGTMNLKQLFTQNTDSSPFDFGVTSSSKSHTVSPFELPDALLNLSAVLAPIISNIVLEDT
GGQFLTQGVKMIESIVRGAENQPNDFLLKDFRKQVYDSMSTVRIAISKRQGKSERFKTAA
SWLYSSDF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggttaccaaaaaaaaagcacgaaaaaatgaagatttcaagaaagtcaagctgaaggtt
ggaaagaagttgaaaaaaacaactaccaccgatacaaccatcaaagccaaacgagtagtt
ttggccagtcaattagaagaaaaagtagaaactgacgtgaatcctttaagctttcgcgga
ttgactctagaagagttgtgcaagcagatgggccatttcaattcgaaagtcaaaatgaat
gctattcaaggattaaaacaaatcctcacatcacgtcctgatctcgttaatatccacttg
aggcttctcgttccttgtgttgctgttcatgtttctgatgcgacatttgaacctcaaact
cgtcaaaatctgctcaatctttacaaaattttgtgcactgcgtccacttcagcaatgtct
gcacatataacgcttttcttggcccacgtacttcgcgctttgacgaatatcgtcactgaa
gttcgtcatcttgccctgaatactttgtctatcctgctcgatcgatatccttctctttgc
tgtaatcacgctgatcttttcccctgtttcatcaattatcttggaagttcgaaacgttta
gcttggaataagccaggtctcattgatacaactctcaattttattaatgtttacgatatg
aatagagaacgaaaagtgatcatcaccaatgtcgaagtcaattacgaaactggaacagtt
gaaggaactatgaatctgaaacagctcttcacacagaacaccgattcaagtccattcgac
ttcggtgttactagttcttcaaaatctcacacagtttctccgtttgaattaccagacgct
cttctcaatctttcagctgttcttgcaccgattatttcaaatattgtattggaagacacc
ggtggccagtttttgactcaaggggtgaaaatgattgaatcaatagtaagaggagccgaa
aatcaaccgaatgattttttgcttaaagatttcagaaagcaagtttacgattcgatgtca
actgttcgaatcgccatttcaaaacgacaagggaaaagtgaacggttcaaaactgcagct
tcgtggctctattcctctgatttctga
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