Caenorhabditis remanei (nematode): GCK72_010428
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Entry
GCK72_010428 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GCK72_010428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_010428
Enzymes [BR:
crq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
GCK72_010428
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
90S particles
Other 90S particles
GCK72_010428
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
HepT-like_2
Motif
Other DBs
NCBI-GeneID:
9800709
NCBI-ProteinID:
XP_003111012
UniProt:
A0A6A5H5P3
E3LZF9
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All DBs
Position
III:complement(10017960..10018783)
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AA seq
231 aa
AA seq
DB search
MSHEYDTVAPPNAKRMKTDAQLELKKTLYVVLEGCSLETAKVGGEYVILSSDKHANFLRK
QKKDPADYRPDILHQCLLNLLDSPLNRDGKLRVFFRTSKNVLVDVSPQCRIPRTFDRFCG
LMVQLLHKLSIRAAETSQKLMSVVKNPVSNHLPVGSRKMLMSYNVPELTLANKLVSPDTD
EPLVVVIGGIARGKIVVDYTDSETKISSYPLSAALTCAKVTSGLEEIWGII
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgaatacgacaccgtagctccacctaatgcaaaacgcatgaaaactgatgcg
caactggaactgaaaaagacactatatgtcgtgctcgagggatgcagtttggaaactgcc
aaagttggaggtgaatacgttattttgagcagtgacaaacatgcaaacttccttcgaaag
caaaagaaagatccggctgactatcgtccagatattttgcatcaatgtcttctcaatttg
cttgacagtccactcaatagggacggaaaacttcgtgtctttttccgaacaagcaaaaat
gtgcttgtagatgtttctccacagtgtagaattccgagaacgttcgatcggttctgtggg
ttgatggttcaactgctgcacaagttatccattcgtgcagctgaaacttcccaaaagctg
atgtctgttgtcaaaaatccagtatcaaatcatcttcctgtcggttctcgtaaaatgctc
atgtcatacaatgttcctgaattgacactggctaacaagcttgtgtcaccagacactgat
gagccactggtagttgtgatcggaggaattgccagaggaaagatcgttgttgattacact
gactcagagacgaaaatcagcagctatccattgagtgctgcattgacatgtgccaaagtc
accagtggactcgaagaaatttggggaatcatctaa
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