Caenorhabditis remanei (nematode): GCK72_010669
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Entry
GCK72_010669 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crq03016
]
GCK72_010669
Enzymes [BR:
crq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GCK72_010669
Transfer RNA biogenesis [BR:
crq03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
GCK72_010669
Prokaryotic type
Methylthiotransferases
GCK72_010669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
9800894
NCBI-ProteinID:
XP_053587559
UniProt:
A0A6A5H5D6
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All DBs
Position
III:complement(10895114..10896842)
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AA seq
452 aa
AA seq
DB search
MEIVRSIMSQYGFVESDQKEKADIVLLMTCSIRDGAEKKVWNQLKLIRSNSVNKRQIVGV
LGCMAERVRHDLLEKRNLVNIVAGPDSYRDLPRLVAVASGGSNAINVQLSLDETYADVQP
IRVDAESRTAFISIMRGCDNMCTYCVVPFTRGRERSRPIDSIVEEVRRLRDQGYKQITLL
GQNVNSYRDMTSMDFPMNPSTTEDRVPGFKTVYKPKSGGLTFTSLLEKVADAAPDVRFRF
TSPHPKDFPMQLIEFIASRTNLCKQLHLPAQSGDDETLDRMGRGYSRDLYLRLVDDIRII
LPNVSLTSDFIAGFCGETEEAHQNTLSLIREVGYSFCFVFPYSMRGKTRAHHRLTDDVPE
NVKARRHLDSTTVFREEAMKLNQKLIGTEQTVLLEGKSKRDVAFSHGRTDGGVKAVFDNS
KSQLNPGQYAKVLITEANSQTLKAEFIRETDL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgttcgatctataatgtcacaatatggattcgttgaaagcgaccaaaaagaa
aaagcagatattgttcttttaatgacatgttcaattagagatggagcagagaagaaagtt
tggaatcaattgaaattgatacgatcgaattcagtgaacaagaggcagatcgttggagta
ctgggttgcatggcagaaagagttcggcatgacttgttggagaagcggaatcttgtgaat
attgtcgcagggcctgactcatatcgagaccttccacgactagtcgccgttgcttccggt
ggttcaaatgctatcaacgtccaactgtctcttgatgaaacatatgcagatgttcaacca
attcgtgtcgatgctgaatcaagaactgcttttatctcgattatgcgtggatgtgacaat
atgtgcacttactgtgtcgttccgtttaccagaggaagagaaagaagtcgtccgattgat
tcgattgttgaagaagtacgaagattacgagaccaaggatacaaacaaattactctgctg
ggccagaatgtcaatagttatcgagatatgacatctatggatttccctatgaatccgtct
acaaccgaagatagagttcctggattcaaaactgtctataaaccgaaaagcggaggtttg
acattcacgagtcttcttgaaaaagtagcagatgctgctccagatgttcggttccgtttc
acgtctccacatccgaaagatttcccgatgcagctaatcgagtttatcgcgtcacgtacg
aatctatgcaaacagctacatcttccagcacaaagtggagacgatgagacattggatcga
atgggaagaggatattcaagagatttatatttacgactagtcgatgatatacggataatt
ctgccaaatgtttcactcactagcgacttcattgccggattctgtggagaaaccgaagaa
gctcatcaaaatacactttccttgattcgagaagttggatattcgttctgcttcgtattt
ccttacagtatgagaggaaaaacccgagctcaccataggcttaccgatgacgttcctgaa
aatgttaaggcacgaagacatttggattcgactacagttttccgagaagaagcaatgaaa
ttgaatcagaaacttattggaacagagcagacagtgttactggaaggaaaatcgaaaaga
gatgttgcattttcacatggacgaactgatggtggggtgaaagcggtgttcgataattca
aagtctcaattgaatcccggacaatatgccaaagttctaatcactgaagccaactcgcag
accttgaaagccgaattcatcagagaaacggacctataa
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