Caenorhabditis remanei (nematode): GCK72_010877
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Entry
GCK72_010877 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04080
Neuroactive ligand-receptor interaction
crq04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GCK72_010877
04082 Neuroactive ligand signaling
GCK72_010877
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_010877
Ion channels [BR:
crq04040
]
Ligand-gated channels
GABA-A
GCK72_010877
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
9812112
NCBI-ProteinID:
XP_053587656
UniProt:
A0A6A5H693
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Position
III:11805595..11808248
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AA seq
481 aa
AA seq
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MVSVFLLPIIALIHGHHAEGIIDMKKQRLNSRSTTYNQTLIRYTTKVLDTILLNQDKNFR
PVNPDNSPLQVEVDISVRSMGPISEQNMEFSLDCYFRQKWLDRRLAFTPINPSKPEIPLA
SKMLKDIWVPDTYIRNGRKSYLHTLTVPNILFRVRSDGQVHVSQRLTIRSRCQMFLKKFP
MDTQACPIEVGSLGYFSRDVIYKWKEVELDSKMGNMLSQYQILSLSKSERNVSDFRFADR
NISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMST
IGFGLRTDLPKVSHSTALDVYILTCFVFLFAAMVEYAVINYAQIVYIRKQVHDLKGLEQN
SAMRMFTAGLMGARRDTIQVDNLAVEKEEARLKAVPWWKKLCNKDEQGNTSVFYRMAVKA
AIAKKTLRNGDPAEVVNKIDNFSKWAFPTLYIIFNVFYWVAYLHLIPDEIDSLPNIAGGL
Y
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcgtcttccttcttcccatcatagcccttatccacggacatcacgcagaagga
ataattgatatgaagaagcaaagactaaacagcagaagcaccacctataaccaaaccctc
atccgatacaccaccaaagttcttgatactattctactcaaccaggacaagaattttaga
ccagtaaatccagataactctccgttacaagtcgaagtggatatttctgtcagatcaatg
ggaccgatttcggagcaaaatatggaattctctctcgactgctacttccgtcaaaaatgg
cttgatcgacgtctcgcgttcactccaatcaatccatccaaaccagaaattccattggct
tcgaaaatgttaaaggatatctgggtacctgatacatatatacgaaatgggcggaaatct
tatttgcatacactgacagtgcctaatatattgttcagagtaaggtcggatggacaagtt
catgtttcgcagaggctgaccatccgttcccgctgtcaaatgttcctgaaaaagtttcct
atggacacccaagcatgtcccatagaagtgggatcacttggctacttttccagggatgta
atttataaatggaaggaagtagagctggactcaaaaatgggaaatatgttgagtcagtat
caaatcttgtctctttctaaatcagaaaggaatgtctccgattttcggttcgccgataga
aacatctccgtcctgaatgtctatttcaaacttcaacgtcaacaaggctactatatcctt
caaatctataccccttgcactcttgtagttgtcatgtcttgggtgtccttttggattaat
aaggaagcatctcctgctcgagtctcattgggtatcatgactgtcttgtcaatgtctacc
attggatttggtctccgtacggatcttccgaaagtttcacattcaactgcacttgatgtt
tatatattaacttgcttcgtattcctctttgctgctatggtagagtacgctgtcatcaac
tacgcccaaatagtttacatcaggaagcaagtccacgatctgaagggtcttgagcagaac
agtgcgatgagaatgttcactgctggactgatgggagcccgacgggacaccattcaagta
gataatcttgctgtggagaaagaggaggcgagactgaaagcagtaccgtggtggaagaag
ttgtgtaataaagatgagcaagggaacacgtcagtcttttaccgcatggctgtcaaagca
gcaatcgccaaaaagacactgaggaatggagacccggcggaggtcgtcaataaaatcgac
aacttctcgaagtgggcgttcccgactctttacatcatattcaacgtgttctactgggtc
gcatatctgcatttaatacccgatgagattgatagtctgccgaatattgctggaggattg
tattga
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