Caenorhabditis remanei (nematode): GCK72_011033
Help
Entry
GCK72_011033 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K26273
protein strawberry notch
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_011033
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
GCK72_011033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
9811465
NCBI-ProteinID:
XP_003111606
UniProt:
E3LX19
A0A6A5H4H9
LinkDB
All DBs
Position
III:<12530144..>12543971
Genome browser
AA seq
1884 aa
AA seq
DB search
MEDILSAALTEAGLEEFLCQPSPVPSTSGSVHDESAPSTSYNNTQSAPPTSYPRAGASNQ
FFDETSNDSMSSSAYYTPMTTPFISTEDGGEPTSFFGMDEEDGGCMITPMTRSSSCTAES
SMYNYPQVQVIPRKQPSVTMDSYEMTKKEEPDESPSGDTSTTGSSNGGNDGYDEKMREIK
EDIKEEEESQQMFVQTNRSQEPHLDSPSTSSTVSPRVSSLSAQRSHTASPASSTVSDTVV
PPPRKNLPITTGSIVKRTVQTKDGQKTQYLKAFVNENGEKIYRLLSPVAASAVARGALPA
GMSRSGVTTNGGGVNGSSNVPVRVGNTMVGQNGERLMVVRNGVGPNGRVMVKRIVTNAGQ
VGTSATRIMAGGGQERGQLYRAAVNGANVPTHLVRRPTAGGLPPRGTPGSMVVRHAVRGS
YNPATNGGYRVNLVGRGTGGSTMVHHQPLSRMGPAATRGTTIGPGGRIVTRGGAIRPGSM
SQQQIHMSASTPSFHYMDENQMTTTSQATTSSGGMMKTVGSAIMQARHMQQFSAVGGGVT
QQAGRVIVNRSSTSGGPLSRMVGGGYDQQLASNGRLIMSTNTMVRVPGSGLGSPRLSLTP
QPQTKSQKAKDEMRMAYQVGRDEAALQRKNDLEDDEENLGYAETYSEYTPAKLRSGTAHP
DSVVESASLSSVSPPDVKYQISIPEYLIDMGHISALQLEAVIYACQMHERRMPSGERYGY
LIGDGAGVGKGRTVACIIFENYLQGRKRAIWLSVSSDLKFDAERDLRDCGAPNIPVFALN
KMKYAKISGKENGSIKKGVIFATYTSLIGECRGAKSRKYRSRISQLIQWFGQDYDGVIIL
DECHRAKNLVPTAGAKPTKTGRMVLELQKALPNARVVYASATGATEPRNMAYMTRLGLWG
ERQAFPEFHDFISAVERRGVGAMEIVAMDMKQRGLYLARQLSFRGVSFAVQEVQLSSEFV
KMYDAAVKLWMEARRQFQTVIETMDEEERSTCKTIWGQFWACHQRFFKYLCIAAKVDTCV
QLSREAIKAKKCVVIGLQSTGESATLETLEEMGGELNEFVSTAKTVLYGLIDKHFPTDTS
ITMGDRDIFKDFDDFESRPAKRRKTRETLSFLGDVGFDTWTGVTTGMGGRVGDGVTKNLT
RGSTSSKLNDEANSTTSESSEADGDSDESDGDEEEDQNGDLASAREEAEGARTLEDGEED
EWVKALLAEAESSSDDSDDDEDGGNAVEKEDDGGENEEREPEEEFNPFMCDFTSDDPWAH
NQQIVEDTPQKERKTKKRKRDEEEAERMREKVRKREERREKKRRRAIRKAEREKRRRNEE
LQARGSATDFITSSRICGQSVEKEDINPMLIKTELLAAVERLAPSLPANTLDQLIDEMGG
PEYVAEMTGRRGHMVTSETGDVMYQRRNANAEVSLELINMEEKEKFMRGEKLIAIISEAA
SSGISLQSDRRAINKRRRVHITLELPWSADKAIQQFGRTHRSNQVSGPEYVFLISELAGE
KRFASIVAKRLESLGALTHGDRRATETRDLSQFNMDNKYGRVALDTLLKTVIGQAGIPLI
EPPKDYKAGDFFEDMRLYMEGVGLLAKNKMGQYTIEKEAATIPKFLNRILGLPVHAQNSL
FQYFSEIVAELIAQSKHDGTYDTGIMDLGTGDDQVRKLETRVFTGRVDNGSFRVEMHKIG
VERGVSWEEAMDLYKEHSNDDDGFYLCHPGGNNTANTKKVAALVYGIGKNKVDSGARLYA
ITRPSTGRSPKLMTMADLSKRFSKVTVDEAKEVWKQQYDSAANMCQHNYIYSKCRTESNG
TYCEVGRRTRTYFVLSGSVLSVWPIVEEVLSTGGDRKSSRMQVIRVRTEQDQKIVGLLVL
PTHVRSLVTQLETHCGRSYVKTEP
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattctatcggccgctctaacagaggccggtctcgaagagtttttatgtcag
ccgtcaccggtgcccagtacttctggaagtgtacacgatgagtccgcgccaagtacaagt
tacaataacacacagagtgctcctccaacatcatatccaagagcaggcgcatcgaatcaa
ttcttcgacgagacatcgaatgactcaatgtcatcttcagcctattacacacccatgaca
actccattcatttcgacagaagacggcggagagcccacttcattcttcggaatggacgaa
gaggacggtggatgtatgataactccaatgacacggagtagtagttgtacggctgaaagt
agtatgtataactatccacaagtacaagttattccaagaaaacaaccatccgtaacgatg
gattcatatgaaatgacgaagaaggaggagccagatgaatcgccttctggagatacgtcg
actaccggatcgtcgaatggaggaaacgatggatatgatgagaagatgagagagattaaa
gaagatattaaggaggaggaggagtcacagcaaatgtttgtgcagactaataggagtcaa
gaacctcacctcgactctccatccacatcatctaccgtatcccctcgtgtctcctcacta
tcagctcaacgttctcacacggcgtctcctgcctcatctacagtatccgatacggtagtc
ccaccgcctcgaaagaatcttcccatcacaacaggatccatcgtaaaacggacggtgcaa
acgaaagacggccaaaagacgcaatatttgaaggcgttcgtcaacgagaacggagagaaa
atataccgtttgctgagtcccgtcgccgcgtcggcagttgctcgcggagcacttccagcc
ggaatgagtcgaagtggagtgacgacgaatggaggaggagtgaacggatcatcgaatgtt
ccagttagagtagggaatacgatggtcggacagaatggagagagactgatggttgtaagg
aatggagttggaccgaatggacgagtgatggtcaagagaattgtgacgaatgcgggacaa
gttggcacgtcagcgacgagaattatggccggtggcgggcaggagaggggacaactctat
agagccgccgtcaacggagccaacgttccaactcacctcgtccgccgcccgaccgctggt
ggtctaccgccacgtggcactcctgggagtatggtagttcgacacgcagttcgtgggtcc
tacaatccggcgacaaacggaggatacagagtgaatttagtgggtcgagggacgggtgga
tccacaatggttcatcatcaaccactcagtcgaatgggaccagcagcgacacgtggaact
acgataggacccggtggacgaatagtgacgagaggaggagcgattcgaccgggttcaatg
agccaacaacagatacatatgtccgcatcgacaccctctttccattatatggatgagaat
cagatgacgacgacgagccaggcgacgacgtcttctggaggaatgatgaagacggtcggg
tcggcgataatgcaagcaagacatatgcaacagttctcagcggttggaggaggtgtaaca
caacaagctggaagggttatcgtcaatagatcctcgacaagcggtggtccactgtctcga
atggttggtggaggatatgatcaacaactcgcatcgaatggacgtctcattatgtcaacg
aatacaatggttcgagtacctggatctggactaggatcaccgaggctctcgttgactcct
cagccacaaacaaagtcacagaaggcgaaggacgagatgagaatggcgtatcaagtggga
cgagatgaggccgcgttgcagaggaaaaacgatttggaagatgatgaagaaaacctcggt
tacgctgaaacatattctgaatacacgccagccaaacttcgttccggaaccgcccatcct
gatagtgtcgtcgaatcggcgtccctatcgagtgtctctccaccagacgtgaaatatcaa
atctcgattccagaatatttaatcgatatgggacatatctctgctctccaattggaagct
gtgatctacgcgtgtcaaatgcatgaaagacgaatgccttctggagagagatatggatat
ttaattggtgatggagctggtgttggaaagggacgaaccgtcgcttgtatcatttttgaa
aactatttgcagggtcgaaaacgtgcgatctggctctcggtctcatcagatttgaaattc
gacgccgaacgagatctgcgtgattgtggtgctccaaacattccagttttcgctcttaac
aagatgaaatacgcaaaaatctctggaaaagagaacggatcgatcaagaaaggagtgata
ttcgccacctatacctcattaattggcgagtgccgtggagcgaaatctcgaaaataccgt
agtagaatcagtcaactgatccaatggttcggacaagattacgatggagtcatcattctc
gacgaatgccatcgagcgaagaatttggtgccgaccgccggagctaagccaacgaagaca
ggaagaatggtgctggaattacagaaggctcttccgaatgctcgtgtcgtctacgcatca
gctactggagccactgaaccaagaaatatggcttatatgacacgtctcggtctgtgggga
gaacgacaagcgtttccagaattccacgatttcatatcggccgtcgagcggagaggagtt
ggagcaatggaaattgtggcgatggatatgaagcagagaggcctctatctggcgagacag
ctctcgttccgtggtgtttcgtttgctgttcaagaggttcagttgtcgagtgaattcgtc
aaaatgtatgatgcggcggtcaagttgtggatggaggcgagacgacagtttcagacagta
atcgagacgatggacgaagaagagcgatcgacttgcaagacgatttggggacaattctgg
gcgtgtcatcagagatttttcaaatatctttgtattgccgccaaagttgacacgtgtgtc
caactgtctcgtgaagcgattaaagccaagaaatgtgtcgtcatcggactgcaatcaact
ggagaatctgcaacactggagactttggaggagatgggcggagagttgaatgaattcgtt
tcgacggcaaagacagttttatacggattgattgataaacactttccaacggatacgtcg
attacaatgggcgatcgagatatattcaaagatttcgacgatttcgagtcgagacccgcg
aaacggagaaagactcgagagacattgagtttcctcggagacgttggattcgatacttgg
acaggagtgacgactggaatgggcggacgagttggtgacggggtgacgaagaatctgacg
agaggatcgacgtcttcgaaactgaatgatgaggcgaactcgacgacgtcggaatcatca
gaagccgatggggattcagatgagtcggacggtgatgaggaagaagatcagaatggagat
ttggcgagtgcacgggaagaagcggagggagcgaggacgttggaggatggagaagaggat
gaatgggtgaaggcgttgttggcggaagcggagtcgtcgagtgatgatagtgatgatgat
gaggatggaggaaatgcggtggagaaggaagatgatggaggagagaatgaggaaagggaa
cccgaggaagagttcaatccgtttatgtgcgattttacaagtgatgacccatgggcgcac
aaccaacaaatcgtcgaagacactccacaaaaagagagaaaaacgaagaaaaggaaacgt
gacgaggaagaagcggaaagaatgcgtgaaaaagtgagaaaacgagaggaacgacgagaa
aagaagcgacgacgagcgattcgaaaggctgaaagagagaagagacggaggaatgaggag
ttacaggcgagggggtctgcaacggactttatcacttcttctagaatatgtggacagtct
gtggagaaggaggatatcaatccgatgcttattaagactgagctactcgcagctgtcgaa
agattggctccatcacttccagccaacacactggatcagttgattgatgagatgggcggt
ccggagtacgtggctgaaatgactggacgacgtggacatatggtgacttctgaaactgga
gatgtcatgtatcagaggagaaatgccaatgcggaagtgtcacttgagttgattaatatg
gaggagaaggagaagtttatgagaggagagaagctcattgcaatcatctcggaagcggcg
tcatctggaatctctctacaatcggatcgaagagctatcaacaagagacgacgagtacat
atcactctggaattgccctggtctgctgacaaggcgattcaacaattcggaagaactcat
cgatcgaatcaagtctccggaccggaatacgtgtttctcatatcagaattggcgggagag
aagagattcgcttcgattgttgcgaaacgtctggaatctcttggagcactgactcatggt
gacagaagagccacggagacgagagatttgtctcagttcaatatggataataagtatgga
cgagtcgcgttggatactctgctgaaaactgtcattggacaggctggaattccgctgatc
gagccgccaaaggattataaggctggagatttctttgaggacatgcgtctttacatggaa
ggtgtcggtcttctcgctaaaaacaagatgggtcaatacacgatcgaaaaagaggcggcc
acaatcccaaagttcctcaatcgaatcctcggattgcccgttcacgctcagaactcactc
ttccagtacttttctgaaatagtcgccgagttgatagctcaatcgaagcacgacggaaca
tacgataccggaattatggatttgggaaccggcgacgatcaagtgaggaaattggagact
cgcgtcttcacgggacgagtcgataatggaagttttcgagtggaaatgcataagattgga
gtggaaagaggtgttagttgggaggaggcgatggatctctacaaggaacattcgaacgac
gacgacggattctatttgtgtcatcctggaggtaacaacactgcgaatacgaagaaagtc
gccgctttggtctatggaatcggaaagaataaagtggattctggagccagactgtacgcg
ataacgagaccgtcgactggaagatctcctaagctgatgacgatggctgatttaagtaaa
cgattcagtaaggttactgtagatgaggccaaggaggtctggaagcaacagtatgattcc
gctgcaaacatgtgtcaacacaactacatctactcgaaatgccgtaccgaatcgaatgga
acatactgtgaagttggtcgtcgtacccgcacatactttgttttatctggttccgtgctg
tcggtttggccgattgttgaggaggttctgtcgactggtggtgatagaaaatcgtcacgg
atgcaggtgattcgtgttcgaactgaacaggatcaaaagattgttggtctcctcgtcctt
cccactcacgttcgttctctcgtcactcaactggaaacgcactgtggtcgaagttatgtc
aagactgagccctaa
DBGET
integrated database retrieval system
