Caenorhabditis remanei (nematode): GCK72_011036
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Entry
GCK72_011036 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K21123
serine/arginine-rich splicing factor 9
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GCK72_011036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crq03041
]
GCK72_011036
Spliceosome [BR:
crq03041
]
Common components
Common spliceosomal components
SR proteins
GCK72_011036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
9811463
NCBI-ProteinID:
XP_003111752
UniProt:
E3LX17
A0A6A5H8E3
LinkDB
All DBs
Position
III:12550354..12551351
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AA seq
317 aa
AA seq
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MSSSSESTIYVGNLPPDVREKEVENLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAK
EAVRSRDGYDFDGKRLRVEFPRGTGPRGPGGRPMRDSGGFRGDEGFRGRDGGFRDGGRGG
GFRGDGGGRGGGFRGDGGDRGGFRRDSGRQGGPLRRSDYRLIVEGLPPSGSWQDVKDHLR
EAGDICYANVENGRGIVEFTRAEDMHKAIRKFDDTKLKSHKGETAYIRVKEDTRSSRSRS
PKTSRRRSRSNTYSRSRSPVSRRRRSESRSPRRRSESPRRRSESPRRRVSRSRSPESSPR
RRDASPDASPRDYSRDD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcctccgagtcgacaatctacgtcggcaacctgccaccagatgtgcgtgag
aaagaagtcgaaaacctattccacaagtacggagacattcgaaacgtcgaagtgaagaca
cgtcacggcgagacgcactcgtttgcattcgttcaattcgactcgcatcgtgacgcaaaa
gaagccgtccgctctcgtgacggatacgatttcgatggaaaacgtcttcgtgtcgagttt
ccacgtggcacgggtccacgtggtccgggtggacgaccgatgagagattcaggaggattc
agaggagatgaaggattcagaggaagagatggaggattcagagatggaggcagaggaggt
ggattcagaggagatggaggaggcagaggaggtggattcagaggagatggaggagacaga
ggaggattcagaagagactcaggtcgtcagggtggtccattgcgtcgaagcgattatcga
ttgattgtcgaaggacttccaccgagtggatcgtggcaagacgtcaaagatcatttgaga
gaggccggcgatatttgttatgcgaatgttgagaatggacgcggaattgtggaattcacg
agagctgaggacatgcacaaggctattcgcaagtttgatgataccaagctcaaatctcat
aagggagaaaccgcctatatccgtgtgaaagaggacactcgctcgtccagaagtcgttct
ccaaaaacttctcgacgtcgctctcgctccaacacttactccagaagtcgttctccagtt
tctcgtcgtcgtcgttccgaatcgagatctccacgtcgtcgttccgaatctccccgtcgt
cgttccgaatctccacgtcgtcgtgtctccagaagtcgttcacctgaatcgtctcctcgt
cgtcgtgacgcttcaccggatgcttctccacgtgattattcgcgtgatgattga
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