KEGG   Caenorhabditis remanei (nematode): GCK72_011703
Entry
GCK72_011703      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K03066  26S proteasome regulatory subunit T6
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03050  Proteasome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    GCK72_011703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:crq03051]
    GCK72_011703
Proteasome [BR:crq03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     GCK72_011703
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_2 AAA_5 AAA_16 AAA_22 nSTAND3 PRS7_OB RuvB_N AAA_lid_PRS2_C TIP49 AAA_28 AAA_33 NPHP3_N AAA_14 Mg_chelatase AAA_3 ABC_tran Parvo_NS1 IstB_IS21 AAA_17 AAA_18 FapA GldM_1st AAA_24 ATPase Prot_ATP_ID_OB_N OapC Sigma54_activat PhoH DUF815 AAA_7 bpMoxR RNA_helicase HR1 AAA_25 AAA_11 DUF5906 APG6_N AAA_19 TsaE DUF4407 NACHT USP8_interact Prominin V-SNARE
Other DBs
NCBI-GeneID: 9810726
NCBI-ProteinID: XP_053588209
LinkDB
Position
III:complement(16721640..16725625)
AA seq 413 aa
MAPPASTDASSLKTTQKLTEESNEETLRKYFRTKVDAAQQKVADKSQNVRRLQAQRNELN
TKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGAR
VALRADSYALHKVLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPE
LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRE
LFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIM
ATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPG
ASGAEVKAVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKNMSIKKLWK
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggcgccaccagcttccaccgacgcatcgagtctcaaaacgactcaaaaattgacggaa
gagtcgaatgaggagactctcagaaagtatttccgtactaaagtcgatgctgctcagcaa
aaagtggccgacaaatcgcaaaacgtccgccgtctccaagcgcaacgaaacgagttgaac
acgaaggttcgtatgctgaaagaggagcttcaacagctccacgagcagggatcgtacgtc
ggtgaagtgagcaaagcgatggataagaagaaggtgttggtgaaggttcatccagaggga
aagtacgttgtcgacgtggataaatcaatcgatatcaactcgttgaatactggagctaga
gttgctcttcgtgcggatagctatgcacttcataaggttcttccgaataaagttgatccg
ttggtctcattgatgatggtagagaaagtgcctgattcgacgtatgaaatggttggagga
ctcgataaacagattaaggagatcaaggaggttattgagcttcctgtgaaacatccggag
ctctttgatgctcttggaattgctcaaccgaaaggagtgcttctttatggaccaccggga
actggaaagacgctgttagctagagctgtcgcacatcatactgaatgtacattcattcga
gtttctggttcggaattggtccagaaattcattggagagggagcgagaatggtgcgtgaa
ctgttcgtgatggctcgtgaacacgctccatcaatcatcttcatggacgaaatcgattcg
atcggatcgagtcgtgtcgagggatcgagtggtggagattcggaagttcagcgtacgatg
ttggagttgttgaatcagttggacggtttcgaggcgaccaagaatattaaggtaatcatg
gccaccaaccgtatcgacattctcgaccccgccctcctccgtccaggacgtatcgatcgt
aaaatcgaattcccggcgccagacgagaaggcgcgtgccgatattctgaagattcattcg
cgtaaaatgaatctgatgcgtggaatcaacatggcaaagatcgctgaacagatccccgga
gcatctggagcagaagtgaaggcggtgtgcacagaagccggcatgttcgcactacgtgag
agacgtattcatgtgacacaggaggacttcgagatggctgttggaaaagtgatgcagaag
gattcggagaagaatatgtcgattaagaagttgtggaaataa

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