Caenorhabditis remanei (nematode): GCK72_011919
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Entry
GCK72_011919 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCK72_011919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_011919
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GCK72_011919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
9818220
NCBI-ProteinID:
XP_053588330
UniProt:
A0A6A5HB94
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All DBs
Position
III:complement(17804494..17805311)
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AA seq
240 aa
AA seq
DB search
MPTIRSNLSIPLTHLNRIDDVRMETDDVEKRSATAFRPLCVKCGVFGAQDGSGYAEFGNT
RVLAQITGPEGDGKWEEAHAKVTITLKGVENETKVAELRADLTSSLSAVIFINKYPGKVI
DIEVTVLSDDGGVLSTAIIAVTLGLAHSGIEHMGLTASAHVALRSNGDYITDPSTSEAED
AIGGVTFAFVPNLGQTTCVNLYGRIPLKATSPLLEFARQRAIALVPTIHKAVVNSVKERK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaatccgctcgaatctcagcatccctctgacccatctgaatcgaatcgacgat
gtccgtatggagacggacgacgtcgagaagagaagtgcgacagcgttccgtccactatgc
gtgaaatgtggtgtttttggagcacaagatggatcaggatatgccgaatttggaaacact
agagtcttggcacaaattacgggtcccgaaggagacggcaaatgggaagaggcgcatgca
aaagtgacgattacactgaaaggagtagaaaacgagacgaaagtcgccgagttgcgtgct
gacttgacatcttctctgtctgcagtcattttcatcaacaaatatcctggaaaagtgatt
gatatcgaagtgacggttctctcggacgatggaggtgttctgtcaacagctatcatcgct
gtcactctcggtttggctcattctggaatagaacatatgggactgacagctagcgctcat
gtggcattaagatcaaacggcgattatatcaccgacccaagcacatctgaagcagaggac
gctatcggcggagtgactttcgcgttcgtcccaaatctcgggcaaacaacatgtgtaaat
ctatacggacggattcctctgaaagccacgtcaccacttttggaattcgcgagacaacga
gcgattgcactggttccgacgattcacaaagcggtggtgaacagtgtaaaggagagaaaa
taa
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