Caenorhabditis remanei (nematode): GCK72_012001
Help
Entry
GCK72_012001 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K19762
ATP-binding cassette, subfamily B, HAIF transporter
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04212
Longevity regulating pathway - worm
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09150 Organismal Systems
09149 Aging
04212 Longevity regulating pathway - worm
GCK72_012001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_012001
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
GCK72_012001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND1
AAA_22
AAA_16
AAA_29
AAA_25
DUF1652
RsgA_GTPase
AAA_23
AAA_21
AAA_15
DUF3987
Motif
Other DBs
NCBI-GeneID:
9818885
NCBI-ProteinID:
XP_003103447
UniProt:
A0A6A5GLQ5
E3MK55
LinkDB
All DBs
Position
IV:complement(218276..220867)
Genome browser
AA seq
653 aa
AA seq
DB search
MLLQSKSATHVLRRDLTARVKNLKLNDNIKRVDRRNAAYLLRHTTWKDLVELYEIAKPFR
KWIILGTSFMVVSSGIFLIIPRILGKLIDQFDSDTRKSEEEITMKIAKFFKEQPMALVGL
LAVGALATAAKVYCLQIAGVNIVGSLRKAVYSSIIRQDMTFFDKNMVGEIGSRHAADTVI
VGYSVSSSLRAGVRAVLVGVGSVGMMLMTSVELSTVSFLTAPIVIGIFKMFGRVQQQCTW
QLQEVAADVNQTAIERMANMKTVRMLSAEEQSISEYIKKGELVLDISKTEALAKGSLIGS
FQFTGYSAFSSILFYGSHLINTGHITYGELSSFCLYAVLAAASLSNISGFYNEVMKGLGA
SSRLLELKNSQPVMNLTTGIRKTDIQEAIRFENVSFAYAGRKKTLENISFDIPRGKITAV
IGPSGSGKSSIASLMLRLYDPADGRITVDGVDLRDINATAWRHAIGTVGQEPVLFTCSIR
ENILMGAEFPDRISQFQLEEAAQLANALDFIQGFENGFETMVGEHGCKLSGGQKQRIAIA
RALISKPKIMILDEATSALDATSDYLIRMTLDNLLKNHNLTVLVVAHRLATMQQADQVVY
VNRGRIEGQGTFDDMMKIQNSIVEQEARRRGIPMNEQMSRVNTPTAYGTSLKF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcaatcgaagtcagcgactcatgttttaagacgagatttgacagcaagagtg
aagaatctgaaattaaatgataatataaaacgagtcgatcgtcgaaacgcagcgtatctc
cttcgacacaccacatggaaagatttggtggaattgtacgaaatcgcgaaaccgtttaga
aaatggattattttgggcaccagtttcatggtggtttccagtggaatctttctaattatc
cctcgaatactgggaaaactaatcgatcaattcgatagtgatactagaaaatctgaagag
gaaataactatgaagattgcaaagtttttcaaggagcaaccgatggcactggttggattg
ttagctgttggtgcactggcgacggctgcaaaggtgtattgcttgcagattgcaggagtg
aatattgttggaagtctccgtaaagcagtctacagttcgattatccgacaagacatgaca
ttcttcgataagaatatggttggagaaatcggttcccgtcatgctgccgatacagtcatc
gtcggttactctgtctcatcatcacttcgtgccggagtacgagcggtacttgttggagtg
ggatctgttggaatgatgttaatgacttccgttgaattatcgacagtttctttcttaacc
gccccgattgtgattggaatattcaaaatgttcggaagggtgcaacaacagtgtacgtgg
caattgcaggaggtggcagcagatgttaatcagacagctatcgaacgaatggccaatatg
aagacagtgagaatgttgagtgctgaagaacaatcgattagtgaatacattaagaaagga
gagctagttctggatatctctaagactgaggcgttggcgaaaggaagtttaattggatcg
ttccaattcaccggatattctgcattctcctcaatcctattctatggaagtcatttgatc
aacacgggacatattacttatggagagctctcctcgttctgtctatatgctgttctagct
gcagcaagtctctcaaatatctccggtttctataatgaagtgatgaaaggtctcggcgct
tcatctcgcctgctggaattgaagaattctcaaccagtgatgaatttgacgactggaatt
cgaaagactgacatccaggaggcaattcgatttgagaatgtgtcatttgcctatgctgga
cgaaagaagacactggaaaatatatcttttgatattccacgtggcaagattacagcagtc
atcggaccatcgggaagtggaaaatcatcgattgcgagtctaatgttgagactatatgat
ccagcagatggacggattactgtagatggtgttgatctacgtgatataaatgcaactgct
tggagacatgcgattggaactgtcggacaagaacccgtcctttttacttgttcgattcga
gagaatattctgatgggagcagaatttccggatagaatcagtcaattccagctggaggag
gctgcacaattggcgaatgcgctggattttattcaaggatttgagaatggttttgagacg
atggtcggcgaacacggatgcaagttgagcggtggtcaaaagcaacgaatcgcaatcgcc
cgcgctctaatctctaaaccaaaaattatgatccttgacgaagcgacaagtgccctagat
gccacgtcagactacttgatccgaatgactttggataatttgttgaaaaatcacaacctg
acagtgctagtcgtggcgcatagacttgccacaatgcaacaagccgatcaagtcgtttat
gtgaatcgtggtcgaatcgagggtcaaggcacttttgatgacatgatgaaaattcagaat
tcgattgtcgagcaggaagcaagacgacgtggaattccaatgaatgagcaaatgagtcga
gtgaatacaccgacggcttatgggacttctttgaaattttga
DBGET
integrated database retrieval system
