Caenorhabditis remanei (nematode): GCK72_012073
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Entry
GCK72_012073 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GCK72_012073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crq03019
]
GCK72_012073
Enzymes [BR:
crq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GCK72_012073
Messenger RNA biogenesis [BR:
crq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
GCK72_012073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
9819148
NCBI-ProteinID:
XP_053583605
UniProt:
A0A6A5GLS2
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Position
IV:<432829..>434403
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AA seq
524 aa
AA seq
DB search
MSSATTTKIYGVSQPISTNAPTKSDFKLTDSLNESLHKFNCYESKEESMTRVKVLSKLNA
LVKRWIKTLTAQRIPNGHELNTGGKLNSFGSYRLGVHNSGADIDALVIAPRHVTRLDFFT
SFKKMLLENSSVKNLECVENAFVPIMTLAFDGIDIDLLFARLEFTKIPDDLDLSNDSILQ
NLDESSIRSLNGCRVAESLLKLVPNRKSFCMTLRAIKLWAKNHGVYSNAMGFFGGITWAI
LVARTCQLYPNAAPSRLIQKVFFVFSTWKWPSPVILKHFNESKMSTLNNLVWDPRINYSD
RFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALIICDQIHAGNATWNNLFEEVNFF
SRYRHFVALSMNEESNEGFFESRIRQLVQIMERNCQVKLAHINPKKFKSVQNVSVWFLGL
ELIENVKNSDLTAEIEGFKKNVEKQAKGIQITLDATYVKRSDLIKWIPVADLKKGRFVNK
STGTTTSKKRPVSSSPPSSEVSQIAAKKPCIDINGPFIKMKSNN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggctactactaccaagatttatggagtttcccaaccaatctcaactaatgct
ccaacgaaatctgatttcaagttaacggattctctcaatgaatctctccacaaatttaac
tgctacgagtcaaaagaggaatccatgacgcgtgtcaaagtgctttctaagctgaatgct
ctcgtcaagcgatggatcaaaactctcacagctcaacggattccaaatggtcatgaattg
aatacaggaggaaaattgaattcattcggatcctatcgactcggagttcacaattcggga
gcagatattgacgctcttgtcattgcaccgagacatgtaacacgtctagacttcttcacg
tcattcaaaaagatgcttttggagaattcgtcagtgaagaatctggagtgtgttgagaac
gccttcgttccaatcatgacgttggctttcgatggaatcgatatcgacttactgttcgca
agactcgaatttactaaaattccagatgatctcgatttgtccaatgactcaattctccaa
aatttggatgaatcatccatcagaagtctaaatggatgcagagtagcggaatcgttactc
aaattagttcccaaccggaagtccttctgcatgacacttcgagccatcaaactttgggcc
aagaatcacggagtttattcgaatgcaatgggattcttcggaggaatcacttgggcaatt
ctcgtggcacgaacatgtcaactgtacccgaacgcagctccatcgagattgattcagaag
gtcttttttgtattctcaacttggaaatggccatctccagtgattctgaagcatttcaat
gaatcgaagatgtctactctcaacaatcttgtgtgggatccaagaatcaactactccgat
cgtttccatctgatgccaatcattactccagcattcccagagcaaaactcaactcacaat
gtgtctaaatcaactcttcatattattcaagaagagatgaaatcggcattgatcatctgc
gaccagattcacgctggaaatgccacgtggaataatttattcgaagaagtcaacttcttc
agtcgttatcgtcattttgtggcactctcgatgaatgaagaaagcaatgagggatttttc
gagtcaagaattcggcaacttgttcaaattatggagagaaactgtcaagtgaaactagca
cacatcaatccaaagaagttcaagagtgtccagaatgtatctgtctggtttttgggactc
gaacttatcgagaatgtgaagaattcggatttgactgcggagattgaaggattcaaaaag
aatgttgaaaagcaagcaaaaggaattcaaatcactctcgatgctacctatgtcaagaga
tcggatttgattaaatggattccagttgccgatttgaaaaagggacgattcgtgaacaag
tcaactggaactactactagtaagaagcgcccagtctcttcgtccccaccgtcatcagaa
gtctctcaaattgctgccaagaagccgtgcatcgatattaatggccctttcatcaagatg
aagtctaataattga
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