Caenorhabditis remanei (nematode): GCK72_012093
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Entry
GCK72_012093 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCK72_012093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_012093
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
GCK72_012093
Prokaryotic type
Archaeal type
TFE
GCK72_012093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
DUF7685
Zn_Ribbon_TF
DUF2652
Motif
Other DBs
NCBI-GeneID:
9812659
NCBI-ProteinID:
XP_003094303
UniProt:
A0A6A5GLU4
E3NBB7
LinkDB
All DBs
Position
IV:complement(557014..562649)
Genome browser
AA seq
441 aa
AA seq
DB search
MSSGTTAATSSSAGNAETQVVDEIPEALNTILLMVVKNFFSNEHFLLVYHIMRAQCIREE
NLKARLQFDQKQLRQLLAQLKLEKLVKERIITQKNENNRTVSIIFYYINYRAVLNVVKYK
IDHMRQKLESREQMDTNRAHYKCNACQSTYDTLDITRILDIETGRLVCWRCHGEVLADES
VAPTKATRSAVARFNEQMNTLYSHICALNGIQLAPHLLEPDIAKYLEDDKAALQLQQQMD
FSSGGGNRIQLGGVAHSYHNAATINYQNGDAVFVDLNAASNKGPVEEAKIIPEWLKDTAI
GGEASHNDNVLDQATNEDDEATSSKSGPDIEWLKEVEYSSEDMKPVKIEEPPAKQIKLEE
DVTTESLEDSEDVKVKMELDGDSDGQEDEECMIHVGGRVLPLSQITPKMVEEEMNVAEQE
EYCIIVQELFALFFSQQCSVY
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggcacaacagcggccacctcctcttcagctggaaatgctgaaactcaggtg
gttgatgagataccggaggcgttgaacacgattctcttgatggttgtcaagaatttcttc
tctaatgagcattttctgctcgtctaccacataatgcgtgctcaatgtattcgagaagaa
aatctgaaagcccgcctccaattcgatcaaaaacaactccgacaacttctggctcagctg
aaattggagaaattagtgaaagagaggataattacacagaagaatgagaataatcgaaca
gtttcaatcatcttctattatatcaattatcgggcggtgctgaatgtggtcaaatacaaa
attgatcatatgagacaaaaactggaatcccgagagcaaatggacacgaatcgggcgcat
tacaaatgcaatgcctgtcagagtacatatgatacacttgatatcactcggatattggat
atcgaaacgggtcgattagtgtgttggaggtgtcacggagaggtattggctgatgaatca
gtggcaccgacgaaggcgacgagaagcgcggtcgcccgtttcaacgaacaaatgaacaca
ctgtactctcatatctgtgctctcaatggtatccaattggctccgcatcttttggaacca
gatatagcaaaatatctggaagacgataaggcggctctccaattacagcaacaaatggat
ttctcatctggcggtggaaatcgaattcaattgggcggagtcgcccattcgtatcacaat
gcggcaacgattaattatcagaatggagatgccgttttcgtcgatttgaatgctgctagt
aataaaggacccgtcgaggaggcgaaaattatacccgaatggttgaaggatacggcgata
ggtggagaagcgtcacataatgataatgtgttggatcaagcaacaaacgaggacgacgag
gcgacatcaagtaaatctggtccggatatcgaatggttgaaagaagtggaatatagttca
gaagatatgaaaccagtgaaaatagaagaaccgccggcgaaacaaatcaaattggaagaa
gacgtgacgacagaatctcttgaggattcagaagacgtgaaagtgaaaatggaattggat
ggagattcagatggccaagaagacgaagaatgtatgatacacgtcggcggacgagttctc
ccgttgagtcaaatcactccgaaaatggtcgaagaggagatgaatgtggcggagcaggag
gagtactgtatcattgtgcaggagttattcgccttgttcttctctcaacaatgctcagtt
tattga
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