Caenorhabditis remanei (nematode): GCK72_012688
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Entry
GCK72_012688 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K04986
polycystin 2
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crq03037
]
GCK72_012688
04040 Ion channels [BR:
crq04040
]
GCK72_012688
Cilium and associated proteins [BR:
crq03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
GCK72_012688
Ion channels [BR:
crq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GCK72_012688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
DsbA_N
DUF2205
Motif
Other DBs
NCBI-GeneID:
9807165
NCBI-ProteinID:
XP_053584092
UniProt:
A0A6A5GNT8
LinkDB
All DBs
Position
IV:7241094..7248970
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AA seq
952 aa
AA seq
DB search
MIYYENRLLGEPRIRMLRVTNDSCTVMKSFQREIKECFANYEEKYEDKTNVADGSVDALL
FELPASGGVITTPKIMTYNLMTCQASSGTRMIVFEGIFCGFILFFIFEELFAIARHRLHY
LTQFWNLVDVALLGFSVATIILSMKRTKTATNRVNSVIENGLTNAPFDDVTSAENAYLNI
KACAIFIAWVKVFKFISVNKTMSQLSSTLTRSAKDIGGFAVMFAVFFFAFAQFGYLCFGT
QIADYSNLYNSAFALLRLILGDFNFSALENCNRFFGPAFFVAYVFFVSFILLNMFLAIIN
DSYVEVKAELARKKDGEGILDWFMNVIAFAQNSIQSYYYTKVMSNLFVSASGANGAPAFG
SCTSMDNIWDWFSQVLIPGIYWTENSNSTDNENMIYYENRLLGEPRIRMLRVTNDSCTVM
KSFQREIKECFANYEEKYEDKTNVADGSVDAYIYATSKELENFDTVGTISTYGGGGFVQR
LPVSGSTEAQSAIATLKANRWIDRGTRAIVVDFALYNANINLFCVVKLLFELPASGGVIT
TPKIMTYNLMTYQASSGTRMIVFEGIFCGFILFFIFEELFAIARHRLHYLTQFWNLVDVA
LLGFSVATIILSMKRTKTATNRVNSVIENGLTNAPFDDVTSAENAYLNIKACAIFIAWVK
VFKFISVNKTMSQLSSTLTRSAKDIGGFAVMFAVFFFAFAQFGYLCFGTQIADYSNLYNS
AFALLRLILGDFNFSALENCNRFFGPAFFVAYVFFVSFILLNMFLAIINDSYVEVKAELA
RKKDGEGILDWFMNKVRGLTKRGKRPDAPGEDATYEDYKIMLYRAGYAEKDINEAFTRFN
VTTMTEHIPEKMAEDIADEVARVTEQKRNYMENHRDYANLNRRVDQMQESVFSIVDRIEN
VNATLQTIEKQRIQQQDGGNLMDLSALLTSQVRNRESARRQTITSIADKKEE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatttactatgagaaccggttgttaggagagcctcggattcggatgttgagagtgacc
aatgactcgtgtactgtgatgaagagtttccagagggagatcaaagagtgttttgcgaat
tatgaggagaagtatgaggataagacgaatgtggcagatggcagtgttgatgcactactc
ttcgagctccccgcatctggtggtgtcatcacgactcccaaaattatgacctacaatctg
atgacctgtcaagcttcctctggtacccgaatgattgttttcgaaggaattttctgtgga
ttcattctctttttcatcttcgaagagctattcgccatcgcccgccaccgtcttcattac
ctcactcaattctggaatctggtcgacgtagcgttgctgggattctcagttgccactatc
atcctatccatgaaacgtacaaaaactgcaacgaatcgtgtcaactctgtcatagaaaac
ggtttgacaaatgctccgttcgatgacgtcacttctgcggaaaacgcgtatttgaatatc
aaagcctgcgctattttcatcgcatgggtcaaggtgttcaagttcatttccgtcaacaag
acaatgtctcaattgtcatctacactgaccagatctgcaaaggatattggaggatttgct
gtcatgtttgcggtgttcttctttgctttcgctcagtttggatacttgtgttttggaact
cagatcgctgactactccaacctctacaactcggccttcgctctcctccgtcttatcctc
ggagacttcaacttctcggctctggaaaactgtaaccgattcttcggtcccgcgttcttc
gtcgcctacgtcttcttcgtgtcgtttattctgctcaacatgttcttggctatcatcaac
gattcgtatgtggaagtgaaggcagagttggctagaaagaaagatggagaaggaattttg
gattggtttatgaatgtgattgccttcgcccaaaatagcatccaatcttactattacacc
aaagtcatgagcaatcttttcgtctccgcctctggcgccaacggagccccagccttcgga
tcttgcacctccatggataatatctgggattggttctcccaagtcctgatccccggtatc
tattggacggagaattcgaattcgacggataacgagaacatgatttactatgagaaccgg
ttgttaggagagcctcggattcggatgttgagagtgaccaatgactcgtgtactgtgatg
aagagtttccagagggagatcaaagagtgttttgcgaattatgaggagaagtatgaggac
aagacaaatgtggcagatggcagtgttgatgcatacatctacgccacatccaaagaactc
gaaaacttcgacactgttggtactatctctacctacggaggtggtggattcgttcaacgt
ctcccggtatctggatccactgaagctcagtcagcgattgccacgttgaaagctaatcga
tggattgatcgaggaacaagagctattgttgtggactttgcgttgtataatgcaaacatc
aatcttttttgtgttgtgaaactactcttcgagctccccgcatctggtggtgttatcacg
actcctaaaatcatgacctacaatctgatgacctatcaagcttcctctggtacccgaatg
atagttttcgaagggatcttctgtggattcattctctttttcatcttcgaagagctcttc
gccatcgcccgccaccgtcttcactacctcactcaattctggaatctggtcgacgtagcg
ttgctgggattctcagttgccactatcatcctatccatgaagcgtacaaaaactgcaacg
aatcgtgtcaactctgtcatagaaaacgggttgacaaatgctccgtttgatgacgtcact
tctgcggagaacgcgtacttgaatatcaaagcctgcgcgattttcattgcatgggtcaag
gtgttcaagttcatttccgtgaacaagacaatgtctcaattgtcatcaacactgaccaga
tctgcaaaggatatcggaggatttgcagtcatgtttgctgtgttcttctttgcattcgct
cagtttggatacttgtgcttcggaacacagatcgccgactactccaacctctacaactcg
gcgttcgctctcctccgtcttatcctcggagacttcaacttctccgcactggaaaactgt
aacagattcttcggtcccgccttcttcgtcgcctacgtcttcttcgtctcgttcattctg
ctcaacatgttcttggctattatcaacgattcgtatgtggaagtgaaggcagagttggct
agaaagaaggatggagaaggaatattggattggtttatgaataaagtccgaggtctaacg
aaacgaggaaaacgtccggatgcccctggagaggacgccacttatgaggactacaagatc
atgttgtatcgtgcaggatacgctgagaaagatatcaatgaagcattcactcgattcaat
gtgaccactatgaccgaacatattccggagaaaatggcggaggatattgctgatgaagtg
gcgagagtgacggagcagaagaggaattatatggagaatcacagggattatgcgaacttg
aaccgtcgtgtcgaccaaatgcaagaatccgtgttcagtattgttgatcgcatcgaaaat
gtgaatgctacccttcaaaccatcgagaaacaaagaattcaacaacaggatggaggaaat
ttgatggatttgagtgcccttctgaccagccaagtccgtaaccgtgaatccgcccgtcgt
caaaccatcacctcaatcgccgataagaaggaggagtag
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