Caenorhabditis remanei (nematode): GCK72_013272
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Entry
GCK72_013272 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_013272
Ion channels [BR:
crq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GCK72_013272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ion_trans
Ank_3
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
9799376
NCBI-ProteinID:
XP_053584537
UniProt:
A0A6A5GN54
LinkDB
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Position
IV:11225183..11233135
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AA seq
937 aa
AA seq
DB search
MGGGSSRNKTEPRGEGVKLAFDPDEKWSNLYREREKNHLYKWVGVRKGGELINIYERDGE
EGVLKFAEEKLLTILYEDGNTPKLVTYSDYIKWKKGVNVQLGLSEESVDMQQSRFKEHHA
LWKLNKRGVEGENLIHLLLNREQQVCYEIARILLKRFPGMANDIYLGDEQFGQSALHLAI
VHDDYETVSLLLNNKADVNARACGNFFLPEDYKLTNKITDYQGYAYYGEYPLAFAACFGN
KDIYDLLIQFGANPNLQDSFGNTILHMCVINYSSSMYSYAVRHWAKPADPHVVNHAGFTP
LTLATKLGRKHIFEEMLEIMKVEFWRFSDMTCSAYPLNTLDTIQPDGSTNYDSALMTVIN
GSTPEHLDMIGSEVIQRLLADKWKAFAQRKLIERLVLLIFQLITLSIVVYIRPTELPRLY
MEEPQWDDWVRTVCEILTIGNCLFFVGYQQFGEIRTQGMRGYLRNLKTAPAKAVFCIANL
FLLLCIPFRLLRKHEIEEALFVFALPGSWIFLLFFARSAKLTGPFVQMIYSMIAGDMIRF
AIISAIFLVSFSQVFYFVGKDMDAKQKLEDTNPHACRISGYTIYTYNTFPETFITLFRAS
MGGYDYEEFSCANYQALTKTLFVLYMFVMPIMMINILIAMMGNTYTTVIAQAEKAWRQQY
AQIVMVLERSVGKERLAASQLEYSIRLDQEGSSGMEVRGLMVIKQTKKTRARQRKQAIYN
WKTIGRKVIHTIDKVGTEQAILLLHGHDRLDRVYEDHVQPEKVPSRSRTPTRIGTTLHSS
KRLKTTMVVGAAAVAAASNTHEIRTDEAVNSMLLSAPPSLSGEGGTMDWQPSITPVEERS
ESKSQGRSEASSPIVVIPPVHSKTPPKADSPVKVQEYSRTVRVRGADSIPSIELPNIPNK
STASTPPHRAVSPRLRADMFRRHPNTSSFDQNPPASE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtggaagttctcgaaacaagacagaaccacgtggcgagggagtcaagttggca
ttcgatcccgatgaaaaatggtcgaatctgtatcgagagcgagagaagaatcacttgtac
aagtgggtcggtgtcaggaaaggcggagaactgataaacatctatgagagagacggagaa
gagggagttctcaagtttgctgaagagaagttgctgacgattctctatgaagatggaaat
actccgaagctggtcacttacagtgattatatcaaatggaagaagggagtgaacgttcaa
ctcggcctcagcgaggagtctgtggatatgcaacaaagtcgtttcaaggaacatcatgct
ctatggaaactgaataagagaggtgtcgaaggggagaatctcattcatcttttgctcaac
agagagcaacaagtgtgctatgagattgcaaggattctgctcaagaggtttccagggatg
gccaatgatatctatttgggagatgagcaatttggtcaatcagctctccaccttgccatc
gtccacgacgactacgaaaccgtcagccttctgctcaacaacaaagcagatgtaaatgca
cgtgcttgcggaaatttcttccttcccgaagactacaaactgacgaataagatcacagat
tatcagggttacgcctactacggagagtatccgttggcgtttgccgcgtgttttggtaac
aaggacatctacgatctgttgattcaattcggtgcgaatccgaacttacaagattcgttc
ggaaatacgattctgcatatgtgtgtcatcaattatagcagttccatgtactcgtacgca
gtccgtcattgggctaaaccagcggaccctcacgtcgtcaatcatgctggattcactcca
ctgacacttgccacaaagttgggtcggaagcacattttcgaggaaatgttggagattatg
aaggtggaattctggagattctcggatatgacgtgttctgcgtatccattgaatacgcta
gacactattcaaccggatggatcgacaaactacgactcggccctaatgacagtaatcaac
gggtcaacaccagaacatttggatatgatcggaagtgaagttatccagagattgttggct
gataagtggaaggcttttgctcaacgcaaattgatcgaacgtctcgttcttcttatcttc
caactcatcactctatcaattgtcgtctacatccgtcccacggagcttcctcgtctttac
atggaagaaccacaatgggatgattgggttcgtactgtctgtgaaatattaaccattgga
aactgtctcttcttcgtcggttatcaacaattcggtgaaattcggacacaaggaatgcgc
gggtatttgaggaatttgaaaaccgcacctgccaaagccgtcttctgcattgccaacctc
tttctcctactgtgtatcccgtttcgattgctccgtaaacacgaaatcgaagaagctctc
ttcgtgttcgccctccccggttcctggattttccttctatttttcgcccgttctgctaaa
ctgactggacctttcgtacaaatgatctacagtatgattgccggagatatgattcggttt
gcaatcatttccgcgatattcctcgtgtcattctcgcaagtgttctactttgtcggaaaa
gacatggacgccaaacagaaactggaagacaccaacccccacgcctgccgaatttctgga
tacacaatctacacttacaacacttttcccgagactttcatcactcttttccgtgcttct
atgggaggatatgattacgaagaattctcgtgtgccaactaccaagccctcaccaaaact
ctcttcgtactgtacatgttcgttatgccaattatgatgatcaacattctcatcgccatg
atgggtaacacttacacgactgtcattgcgcaggctgaaaaggcatggagacaacaatac
gcacagattgtgatggttctggaaagatctgttggaaaggaacggttggctgcgagtcag
ttggagtacagtatcagattggatcaggaaggttcatcaggaatggaagttcgtggcctt
atggtcatcaaacaaaccaagaaaactcgtgcacgtcaacgtaaacaagcaatttataac
tggaaaacaatcggaagaaaagtgattcacacaattgacaaagtgggaacagaacaggct
atcctcctcctccacggacacgatcgcctcgatagagtgtacgaagatcacgttcaaccg
gagaaggttccaagtagatcaagaactccaactcgtatcggaaccactttacactcctca
aaacgtctcaaaaccacaatggtcgtaggcgccgccgctgttgccgccgcgtccaacact
cacgagatccgaaccgatgaagctgtcaacagtatgttactttctgcaccaccaagtttg
tcaggagagggaggaaccatggattggcaaccctctattacgccagtggaggagagaagt
gaatcaaaatcacaaggaagatcagaagcgtcaagtccgattgtagtaatcccaccagtt
cactccaaaacaccaccgaaagcagactcaccagtcaaagtgcaagaatatagccgaaca
gtccgagtccgtggagccgactcgattccctccatcgaacttccgaacatcccgaataaa
tcgacagcatccacacctccacatcgtgcagtctcaccacgccttcgagcagatatgttc
agaagacatccgaatacgtcttcgttcgatcagaatccaccagccagtgaataa
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