Caenorhabditis remanei (nematode): GCK72_013414
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Entry
GCK72_013414 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GCK72_013414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_013414
Membrane trafficking [BR:
crq04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
GCK72_013414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
GPI2
Arrestin_C
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
9819922
NCBI-ProteinID:
XP_053584607
UniProt:
A0A6A5GR63
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All DBs
Position
IV:complement(11882057..11885009)
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AA seq
640 aa
AA seq
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MTSPTRWQKILYRKQPFPDNYSGGDAQFLKELRKNVSVVHYDYKSAVFGCMNFLTHLDML
TMYFVLFLNILHSNWSPNILYGVFTSTIVFYLFFCKFLTPNVANGKEHARTIVTLFLFAY
AFTPVIRTLTTSISTDTIYSTSIITAILSCFFHDYGVKAPVVSYPTSVSSGLSSAIFLLS
RLEEDTPTLLLLVVAFTLHAYGAEFRNRLFHVYPSISSILFCALSLFSIYCISSFSVELS
VFWTLLHVFILFVCPLILILKQTGKCTIHGPWDEAVPIKSINRIRMAMLFGFGQSADIQI
RLSNEDTRKVIKSRGDDGNMHDNFLYYDGESVTGTVQVNLKKANHKFEHQGIRIEFIGQI
EVYYDRGNQQDFISLTRELARPGDLTQNAQFPFEFNNVEKPFETYMGTNVKLRYFLRVTV
IRRLTDLTKEIDLVVHALSSYPDNDKSIKMEVGIEDCLHIEFEYNKNKYHLQDVIVGKIY
FLLVRIKIKYMEIAILKTEIVGSGPNTFKESETVAKFEIMDGAPVRGESIPIRLFLAGYD
LAPSMRDVGKKFSVKYFLNLVLIDEEDRRYFKQQEVTLWRKADKVLRRPGSDEAEEELQT
SIPGTQKFTAPAPVEHPKPESPRSDPKSGSTSPDDNSDSS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaccaacgagatggcaaaaaattctctatcgaaaacaaccgtttccggacaat
tattcgggtggagatgcacaatttttgaaggaattgcgaaaaaatgtgtcagtcgtccat
tatgactataaaagtgcagtattcggatgcatgaattttctcactcatttggatatgctc
acaatgtattttgttttgtttttgaatattcttcactcaaactggtcgccaaacattctc
tacggagtcttcacttcaactatcgtcttttatctcttcttctgtaaatttctgactcca
aacgtcgcgaatggaaaagaacacgcgagaactatcgtcactttgtttcttttcgcgtat
gctttcactccggtgataagaaccctcactacttcgatcagtacggatacaatctactcg
acgtcaataatcactgcgattctcagttgtttctttcatgattacggagtgaaagcacca
gtagtttcatatccaacatctgtgagcagtgggttgagttctgctatcttcttgttgtca
cgactggaagaagacactccgacacttctactcctcgtcgtcgccttcacacttcacgcc
tacggagctgaattcagaaatcgattgttccacgtgtatccttcgatatcttccatcctt
ttctgtgctctctctttgttttctatttattgcatctcctcgttttcagtcgagctttcc
gtgttctggactctacttcatgttttcattttattcgtttgcccactcattctcatttta
aaacaaaccggtaaatgcacgattcatggtccgtgggatgaagcggttccgattaaatcg
ataaatcgcatcagaatggcgatgctcttcggctttgggcaatcagcagatatccagatt
cggctctcgaacgaagatactcgaaaggttatcaaatctcgcggtgatgacggaaatatg
catgacaactttctatattacgatggtgaatcagtaacgggaactgttcaagttaatttg
aagaaagccaatcacaaattcgagcaccagggtattcgaatcgaatttattggacaaatt
gaagtatactatgatcgtggtaaccagcaggactttatctcgttgacacgtgaactcgct
cgtcccggagatctcacccagaatgcacagtttccattcgaattcaacaatgtggaaaag
ccattcgagacgtatatggggacgaatgtgaagctgagatattttctccgtgttactgta
ataagaaggctcaccgatttgacgaaagagatcgatctggtcgttcatgccctcagcagc
tatcctgacaatgataaatcaatcaaaatggaagttggaattgaggattgtcttcatatc
gagtttgagtacaataagaacaagtatcatcttcaagatgtgatcgttggaaaaatctat
ttcctgttggttcgcatcaagataaaatacatggaaattgcgattctcaagactgaaatc
gtcggatccggaccgaatacattcaaagagtcggaaactgtcgccaagtttgagattatg
gacggagcaccggtgcgcggagagtcaattccaattcgattgttcttggctggatatgac
ttggcgccgtcgatgagagacgttggaaagaagttttcagtcaagtacttcttgaatttg
gtgctgattgatgaggaggatcgcagatatttcaagcaacaggaagtcacactctggcga
aaagcggacaaagtgttgcgtcgtcctggatcagatgaggctgaagaggagttgcagacg
agcatccctggaacgcaaaagttcaccgcacccgcgccagtcgaacatccaaaaccagaa
tcgccaagatctgatccaaaaagtggatcgacgagccctgatgataactcagattcctca
taa
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