Caenorhabditis remanei (nematode): GCK72_013587
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Entry
GCK72_013587 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K25374
bactericidal permeability-increasing protein
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
GCK72_013587
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Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
9819109
NCBI-ProteinID:
XP_003103449
UniProt:
A0A6A5GRZ6
E3MJX0
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Position
IV:12639509..12642653
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AA seq
613 aa
AA seq
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MHFQILMTSCFNRPIISLFILLFFSLFISLINSIDSDTHVFHPLLAAPRTLPGVRVRILP
RGLAYLNNIAANLLADQLPRLVIPDVEHILPSNQGIIYISRIHLSRFRRAEHHQLNSTAP
NKISWTMQNMDIGLLGDLSGSVNIVVPLNLTGQVEILAQGLTFHLESSIEKGINGSAKVT
SLSCLATIRDVTVTNHNGGLFGLAVSVFKQGVSDNVRHMLQSIICKKVRKYIDEDANEKL
AEAQTSSKLGDALETNALKMISVGGDEKSRIDIASIFDSSLASKFFIDFRLKEHPICNEN
TVDLASWGEISYMGQGDTPFGPIDSSWPGKSPFKTNVVDSVTSKDSMIELVVSDFLPNSL
LYHAYVQRFIKVLLTPRTKGVASFLRTTCEGSFCISDLAPQLAEQYPNSTVELAMSATRA
PAVLFSEKNGGTISVSMGGLVVVFAVNGNHRRQVIVVDLDVVADAKLSIQGHNVSGSVEL
RKFELKRRTGTVDISDAEIDDIALLVSQLSENLLNGLLVNGMPIPLPHVLRIKDSHINVL
SRRMHIQVDVDVDERRLSKLASQTFFKTPQFSDVNFSPLRRMVRPVPFLEGRQHLQQFNF
NNWSTDNTRRIFR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcagatattgatgacgtcatgcttcaatcggcccataatatctctatttata
ctccttttcttctctttattcatcagtcttatcaattcaatagacagtgacactcatgtg
ttccatcccttacttgctgcaccacgaacacttccaggagtacgtgtcagaatattacca
cgtggattagcgtatttgaataatatagctgcaaatcttctcgcagatcaacttcctcgt
ctagttatcccagatgttgaacatattctcccaagtaatcagggtatcatctatatttca
agaatccatttatcacgattccgacgcgctgaacatcatcagctgaattcgacggcacca
aataagatctcatggaccatgcagaatatggatattggacttcttggagacttgagtgga
tcagttaatattgtagttccacttaatttgacaggacaggtggaaatcctggcacaagga
cttactttccatttggaatcgtcgatagagaaaggaataaacggttcagccaaagtgacg
tcactctcttgcctcgccacaatccgagatgtaacagtcacaaatcacaacggaggactc
tttggattagcagtgtctgtattcaaacaaggagtctctgataatgttcgacacatgctt
caatcgattatttgcaagaaagtcaggaaatatatagatgaagatgcgaatgagaagttg
gcagaggcacagacttccagtaaattgggagatgctcttgagacgaatgcattgaaaatg
atatcagttggaggggatgaaaagtctagaattgatattgcaagtatttttgattcgtcg
ttggcatccaagttcttcattgacttcagactaaaagagcatccaatttgcaatgaaaac
acagtggatcttgcctcttggggagagatttcatacatgggacaaggtgacactccattc
ggaccaatcgactcttcatggcctggaaaatctccgttcaaaacgaatgtggtcgattca
gtgacaagtaaagactcgatgattgagttggttgtgtcggatttccttccgaattcgctc
ctttatcatgcttatgtacagagattcataaaagtgttgctcactccaagaaccaaaggt
gtcgcctcatttctccgaacaacttgtgaaggctctttttgtatttctgatttggctcca
caactcgctgagcagtacccaaattcaactgttgagttggcaatgagtgccacgagagca
cctgcagttctgtttagtgagaagaatggaggtaccatctccgtgtcaatgggtggtttg
gtagttgtattcgctgtgaatggaaatcatcgtcgtcaagttattgtagtagatctggat
gtagttgctgatgcgaagttgtctattcagggtcacaacgtgagtggatctgtggaactt
cggaaattcgaactgaagcggagaactggaacagtggatatttctgatgctgaaattgat
gacattgctcttctcgttagtcagttgtcggaaaatctgctgaatggattactggtcaat
ggaatgccaattccacttcctcatgtcctccgaatcaaagacagtcacatcaatgtactg
agtcgtcgaatgcatattcaagttgacgtagatgtagacgagagaagattatccaaactt
gcatctcagacattcttcaaaaccccgcagttttccgatgtgaacttcagtccactccgt
cgaatggttcgtccagttccgttcctcgaaggccgtcaacatcttcaacaattcaatttc
aacaattggtcaactgacaatacgaggagaatattcagatga
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