Caenorhabditis remanei (nematode): GCK72_013715
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Entry
GCK72_013715 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
GCK72_013715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crq03400
]
GCK72_013715
Enzymes [BR:
crq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
GCK72_013715
DNA repair and recombination proteins [BR:
crq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
GCK72_013715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
zf-C2H2_9
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
9818806
NCBI-ProteinID:
XP_003100914
UniProt:
A0A6A5GPG8
E3MS52
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All DBs
Position
IV:13245359..13248622
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AA seq
860 aa
AA seq
DB search
MSRVKKEKKEKVLSSAGPVSYKRSILAAFEKQSNGRICPLCKVKFSLASYKSHMNECNVA
EDDDEIEVLATYTREEAVLLRAGPEIVLGEESFSEITSNPKKRRRTEKIEELESTSAPPN
NVVLGTPRPTTCNENLETSLQSSEVTENIANHVRNIKTSPDSENHRRKSTRVLRSESQQG
PVKKESATIAEVIDTIDNFESRTANTPLPYYVKCTIRILKRVISTMKTDGTYYSDDFWLP
GDIITFYRFVNELSDGAKCLLVRLFIRKPVWYHLEKLEQKYPEVQNINEVVVELTKMEFV
DDDSSLKSLEEALKISDVSVLKNIAKKFKIDSNKNRQETIQSIKCFAQSQQSIFGGTGSV
EASVLKALKKELGTCVKIRDGFVDLFKCLFTVYCPVTTNSANVIDNSSATNVYQDLLFMM
LSVENGTVQFPALNPCPTITSFYKDRRMLMEYVIAKSLETTLVLNMSNGNHETALDLAID
AKEFLDQMPEEHKRYYDSLEVHERKFTPIWVHTRCCGHATTLLEKQKKYGMAVEWQRDLL
ITNKDVQLYCIDSRGLWWDRMLLNLDSHLKEKQECAKMIQLAINDPSVLEKELLSIQDRA
LKLKEMPPDFRPPLNIGIPKKRVISARTIAKSLGDGRLNRFVIRDDEKEEDVECSVEEAA
RRWYMENEGYTIGVHDEGATWHTLFGLIFYDIIFSTEEGVASTWHSEVQDCPSDLSNTLY
SKRKEKFEDRFEWLGEVDQEVIEDNIRKIWTLKQNETNRECSWKHFPSGVEDCVGLFQCI
SRTALVSIFRRLAENYRNSRSGFPDLTLWNPEKKTVAVIEVKGPGDRLSTKQRLWLSVFA
DNGIESEVCHVEAQNSRLLV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagtgaaaaaagaaaagaaagagaaggtattgagttcagcaggtcctgtcagc
tacaagcgatcaattttagctgcgtttgagaagcaatccaatggaagaatatgtccgcta
tgcaaagtgaaattttcgttggctagttacaaatctcatatgaatgaatgtaatgtggca
gaagacgatgatgaaatagaggttctggctacttatactcgggaagaagcagtgttatta
agagctggtccagaaatagtactgggtgaagaaagtttctcggagattacttcaaatccg
aagaaaagaagaagaactgagaaaatcgaagaactagaaagtacgtcagcaccgccaaat
aatgttgtcttgggcactcctagaccaacaacctgtaatgaaaatctggagacatcatta
cagtcttcagaagtcacagaaaacattgcgaatcatgtgagaaatatcaagacatctcct
gattctgaaaatcatcgaaggaaatctaccagagtgttacgaagtgaaagtcagcaagga
cctgtgaaaaaggagtcggcgacaattgcagaagttattgatacgattgataacttcgaa
agccgaactgccaatacccccctaccgtattatgtgaaatgtacaatccggattttaaaa
cgtgtcatttccacaatgaagacggatggtacttattattccgatgatttctggctgcct
ggtgatataataacgttttaccggtttgtaaacgaactttcggatggagcaaaatgtctt
cttgtacgattattcatccgaaaaccagtatggtatcatttggaaaagttagaacaaaag
tatcccgaagttcaaaacattaacgaagtggtagtggagttaacgaagatggaatttgtg
gacgatgattcttcactgaagtctcttgaggaagctcttaaaatttccgatgtttccgtt
ttgaaaaatatcgcaaaaaagttcaagatagattcaaacaagaatcgccaagaaaccatt
caatcaatcaagtgtttcgcccaatctcaacagtcaatatttggaggaactggaagcgtt
gaggcatcagttttgaaagctctcaaaaaggaattaggtacttgtgtgaaaattcgagat
ggatttgtagatcttttcaagtgcctcttcaccgtatactgccctgtcaccactaattct
gctaatgtaattgataattcgtcagccacaaatgtatatcaagatttactgtttatgatg
ctttctgtagagaatggtactgtacaatttcccgcattgaatccatgcccgactattacg
agtttttataaagacagaagaatgctaatggaatatgtgattgcaaaatctcttgaaacg
actttagtcttgaacatgtccaacggaaaccatgagactgctctcgatttggcaatcgac
gcgaaagaatttctggatcaaatgccggaagaacacaaacgatattatgacagtttagag
gttcatgaacggaagttcacaccaatttgggttcatacgcgatgttgtggacacgcgaca
actttactcgaaaaacagaaaaaatacggaatggctgtggaatggcagagagatttactg
attactaacaaagacgttcaactatattgtattgattctcgtggattgtggtgggatcga
atgttgctcaatctggattcacatttgaaagagaaacaagaatgcgcaaagatgattcaa
ctagctatcaacgacccgtcagttcttgaaaaagagcttctatcaattcaagatcgtgct
ctgaaattgaaagaaatgcctcctgatttccgaccgccactaaatattggcattcccaaa
aaacgagtgattagtgcaagaactatagcgaaaagtcttggtgacggaagactcaatcga
tttgtgatacgagatgatgaaaaggaagaagacgtggagtgctctgttgaggaagctgca
agaagatggtatatggagaatgagggatacacgattggtgtccatgatgaaggtgccacg
tggcacacactgttcggactcatcttctatgacatcatcttttctacggaagaaggcgtg
gcatccacttggcacagcgaagttcaagattgtccatctgatctaagtaatacactctat
tcgaaacgaaaagaaaagttcgaggatcggtttgaatggttgggagaagtagatcaggaa
gtaattgaagataatatacgtaaaatatggacattgaagcaaaacgaaacgaatcgagaa
tgttcttggaaacattttccgtctggagttgaagattgtgtgggtctcttccaatgcatt
tcccgtactgctctggtgtcaatctttcgtcgtcttgctgaaaattaccgaaattcacga
tcaggtttcccggatttgacgctttggaatcccgaaaagaagacggttgcagtcatcgaa
gtgaaaggtccaggagaccgtctgtccacgaaacaacgactttggttatcagtttttgct
gataatggaattgaatcggaagtgtgccacgtggaagcgcaaaattctagactactggtg
taa
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