Caenorhabditis remanei (nematode): GCK72_013860
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Entry
GCK72_013860 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCK72_013860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_013860
Enzymes [BR:
crq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCK72_013860
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
GCK72_013860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
9828698
NCBI-ProteinID:
XP_053584800
UniProt:
A0A6A5GRX7
LinkDB
All DBs
Position
IV:complement(13771898..13776717)
Genome browser
AA seq
1402 aa
AA seq
DB search
MGKEQFREADKALKVVGVKFAPGDCEFMRQTAHVPIFNNKLYEDVGGKLQPANYGPLDPR
MGVSTKTGTCATCGLGLTDCVGHFGYFDLDVPVFHIGFFKLTIQLLQCICKNCSSILLNP
EQHRVFSRQVMNPNIDYLHRKALHKRIVAACKKSSTCTQCGLKNGTVKKAVGTVLKIAFA
SPVPADELGKYATMFNANQEVGDHVKKMKFTLLNPLFVQKLFANVKQADIPVLMVRSGEE
KHPNDLLLTRMPVPPVCIRPSVVSEVKSGTTEDDVTMKLMEIMLTNDVLKKHKRDGAPSK
TLFETWEHLQIQCALYINSEMSGLPPDMQPKKAMRSFTQRLKGKQGRFRGNLCGKRVDFS
GRTVISPDPNLRIDQVGVPIHVAMTLTFPEIVNASNIEKMRQLVINGSDIHPGANYLVDK
KTGNKKLLKYGKRDELAKLLRLGDTVERHLDDNDVVLFNRQPSLHKISIMSHRAKVMPGR
TFRFNECACTPYNADFDGDEMNLHLPQTYEAKAEASELMNVKNNLITPRSGEPLVAAIQD
FITGGYLLTHKDTFLPRAEVYRFAAALIDASAKKQTKIRIPPPAIRKPVELWTGKQLIEL
IIRPDKGSQISLNLTAKNKSYSGNLELCSKDSYVIIRNSVLLAGVLDKSLLGSSSKVNIF
YMLMRDYGEDAAVDAMWRLARMAPVFLSNRGFSIGIGDVRPSERLLQEKGQLVDTGYEQC
AQYIRELEEGKLKAQPGCTEEETLEAIILRELSTIRDHAGQVCLRNLSKYNAPLTMAVCG
SKGSFINISQMIACVGQQAISGHRPPDGFEERSLPHFERKKKTPEAKGFVANSFYSGLTP
TEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKCLEDLCASYDGTVRSSVGDVIEFVFGE
DGLDPAMMEAKDGSVVDFTHVLEHAKNIQTKKETPIPADKLEDVLKNEVQKQFKGKYPHF
AEQLKDYLLQTEIRKSKKWQNGKTHCSQHETAEENIREKCAKCKNMTEYRSLLLTNSCLT
KTQLHSFIQLCYYKVARAITEPGTAVGAIAATSIGEPSTQMTLKTFHFAGVASMNITQGV
PRIKEIINAVKTISTPIITAALLDPYDESLARRVKARIEKTTLGEICDYIEEVYLPDDYF
LLVKLNSKRIRLLQLEVSLESIAFAISTSKVCPMMRGCKIVAHGKTMMAIRPPSTSKLSK
TMTMQMLKYSLGNVVIKGISSVNRCVIHADEKKGDFYSLLVEGTDFRSVLSSVGVDPRKT
NFNNALVVAEVLGIEAARTCIINEIIATMDAHGIGLDRRHVMLLADVMTYRGEVLGITRN
GLVKMKDSVLLLASFEKTMDHLFEAAFFSQRDVIHGVSECIIMGTPMTVGTGTFKLMQKH
EKKAILKQNSPIFQRPETTITL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaacagtttcgcgaggccgataaagctttaaaagttgtcggagtaaaattc
gcgccgggagattgcgagtttatgagacagacggcacatgtgccgattttcaacaataaa
ctgtatgaagatgttggtggaaagctacaaccagctaattatggtccacttgatccaaga
atgggagtttctacaaaaactggaacatgtgctacatgtggacttggattgactgattgc
gttggtcatttcggctacttcgatctcgatgttccagtttttcacattggattctttaag
ctcacaattcagttacttcagtgcatttgcaaaaattgttcatcaattctgctcaatcca
gaacaacatcgtgtcttttctcgccaagttatgaatcccaatatcgactatttgcaccga
aaagctttacataaacgaattgttgcggcatgtaaaaagagctcgacttgcactcagtgt
ggattaaaaaacggcaccgtgaagaaagccgttggaaccgtcttaaaaattgctttcgca
agtccagttcctgctgatgaactcggaaaatatgcgacaatgttcaatgctaatcaagaa
gtcggcgatcatgttaagaaaatgaagtttacacttctcaatccactttttgtacaaaag
ttattcgccaatgtcaagcaagcggatattccggttctaatggtccgttcaggagaagaa
aaacacccaaacgacctcctattgactcgcatgcctgtgccacctgtatgtattcgacca
tcagttgtttctgaagtcaaatcaggaaccacggaagatgatgtcacaatgaaactgatg
gagattatgctgaccaatgatgttctgaaaaaacacaaacgggatggggcaccaagcaaa
actttgtttgaaacctgggagcatcttcaaattcaatgtgctctttatatcaactcagaa
atgtccggacttcctccagatatgcaaccaaaaaaagcaatgcgatcgttcactcaacgt
cttaaaggaaaacaaggtcgattccgtggaaatctttgcggaaaacgtgttgatttctct
ggtcgtactgttatttcacccgatccgaatcttcgaatcgatcaagttggtgttccaatt
cacgttgcaatgacattgactttccctgaaatagttaatgcatcgaacattgaaaaaatg
agacaactcgttatcaatggaagcgatattcatccaggagccaattatctggttgataag
aaaacaggaaacaagaagttgttgaaatacggaaaacgagatgagttggctaaacttcta
cgactcggtgatactgtggaacgtcatctggatgataacgacgttgttctgttcaatcgt
cagccttctcttcacaaaatttcaattatgagtcatcgcgcgaaggtaatgccgggaaga
acatttcgattcaatgagtgtgcatgtacaccatacaatgccgatttcgacggagacgaa
atgaatttgcatttgccacaaacatatgaagcgaaagctgaagcaagtgagctcatgaat
gtgaagaacaacttgatcacacctcgttctggagaaccattagttgctgccattcaagat
ttcattactggaggatacttgctcacccacaaagacactttccttccgagagctgaagtt
tatcgttttgctgctgcactcattgacgcctcagccaaaaaacagacaaaaataagaatt
ccaccaccagctatcagaaaaccagtggaactttggactggaaaacagctcatcgaactc
attattcgccccgacaaaggatctcagatctcactaaatcttactgcgaaaaataagtcg
tattcaggaaatttagagctgtgctcgaaagattcctatgttatcattcgaaattcggtt
ctcctggctggtgtcctggataagtctcttcttggatcttcatcaaaagtaaacattttc
tatatgttaatgagagattacggagaagatgcagctgttgatgcaatgtggaggttagca
cgaatggctccagtcttcctttcaaatcgaggattctccattggaatcggtgatgtacgc
cccagtgaaagattgcttcaagagaaagggcaactggttgacacaggttacgaacaatgc
gctcaatatattcgtgaattagaagaaggaaaactgaaagctcaaccaggttgcactgaa
gaagaaactcttgaagctatcattcttcgagaactttctacgattcgtgatcatgctgga
caagtgtgtcttcgtaatcttagcaagtataatgcgccattgactatggctgtatgtggt
tcgaagggttcttttatcaacatttctcaaatgattgcatgtgtcggacaacaggctatt
tctggacatcgaccaccggatggattcgaagagcgatctcttcctcatttcgagcgaaaa
aagaagacaccagaagctaaaggattcgtcgcgaacagtttctattcaggactcactcca
actgaattcttcttccatacaatgggaggacgtgaaggtcttgtcgatactgctgtaaag
actgccgaaactggatacatgcaaagacgtcttgtcaagtgtttggaggatctctgtgca
tcatacgacggcaccgtacgatcttctgttggagatgttatcgaattcgttttcggagaa
gatggtttagatccagcaatgatggaagctaaagatggaagtgttgttgatttcactcat
gtattggagcatgcgaagaatattcagacgaaaaaagagacaccgatcccagctgataaa
ctggaggatgttctgaagaacgaagttcaaaagcagttcaaaggaaaatatcctcacttt
gctgagcaactcaaggattatcttcttcaaactgaaattaggaagagtaaaaaatggcag
aatggaaaaactcactgttcacaacatgagacagctgaagagaatatcagagagaagtgt
gcaaagtgcaagaacatgactgaatacagatcgttacttctcactaattcgtgtttgaca
aaaactcaacttcacagtttcatacaattatgttactacaaggtggccagagccatcaca
gaaccaggaactgctgttggagcgattgctgccactagtattggagaaccatcgactcaa
atgaccctgaaaactttccatttcgccggtgttgcttctatgaacatcacacagggagtt
cccagaattaaggaaattatcaatgcggtcaagactatctcgaccccaattatcactgca
gcattgttggatccatatgatgaatcattggcaagacgagtaaaagctagaattgaaaag
acaactcttggagaaatctgtgattacatcgaagaagtctatctgccagacgactatttc
ttgctcgttaaactcaactctaaacgtatccgcctactgcaattagaagtttcactagaa
tctattgcctttgcaatttctacatcgaaagtttgtccgatgatgagaggatgcaagatt
gttgctcatggaaagacaatgatggcaattagaccaccttcaactagtaaattgagtaaa
acaatgacaatgcaaatgctcaaatactctctcgggaacgttgtcattaaaggaatctct
tcagtcaatcgttgtgtcatccacgctgacgaaaagaagggagacttttattcacttctt
gttgaaggaactgatttccgatctgttctttcttctgttggtgttgatccaagaaaaact
aatttcaataatgctcttgtggtagctgaagttcttggaattgaagctgctcggacatgc
attatcaatgaaattattgccactatggatgcccacggaatcggtttggatagaagacac
gtgatgcttctcgccgatgttatgacctatcgaggagaagtgctgggaatcactcgaaac
ggccttgtcaagatgaaggattcagttcttcttcttgcttcgttcgaaaaaacgatggat
catttgttcgaagcagccttcttctcgcagagagatgtgattcacggcgtttctgagtgc
atcattatgggaaccccgatgactgtcggtactggaaccttcaagttgatgcagaagcac
gaaaagaaagcaatactcaaacagaattcgccaatttttcagcgccccgagacaactatc
accctttaa
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integrated database retrieval system