Caenorhabditis remanei (nematode): GCK72_014048
Help
Entry
GCK72_014048 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq04136
Autophagy - other
crq04140
Autophagy - animal
crq04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
GCK72_014048
04140 Autophagy - animal
GCK72_014048
04136 Autophagy - other
GCK72_014048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crq04131
]
GCK72_014048
04121 Ubiquitin system [BR:
crq04121
]
GCK72_014048
03029 Mitochondrial biogenesis [BR:
crq03029
]
GCK72_014048
Membrane trafficking [BR:
crq04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
GCK72_014048
Atg8 conjugation proteins
GCK72_014048
Ubiquitin system [BR:
crq04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
GCK72_014048
Mitochondrial biogenesis [BR:
crq03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
GCK72_014048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
IIGP
Motif
Other DBs
NCBI-GeneID:
9828596
NCBI-ProteinID:
XP_003107763
UniProt:
E3M7N4
LinkDB
All DBs
Position
IV
Genome browser
AA seq
642 aa
AA seq
DB search
MATFVPFKTFLDTAFWREVNKKKLHDWKLDESPKEIYSQLSLYDTKGSECALSLSHDSFT
SSLEASNGLSISGSLILYNTRESFKAAATTNSREELMELKTTKIWDAVQSRSWLQNPQLL
NTFFIIAFADLKKFHYIYKTCVPALIFPKEIQQEIVPLTAYNANESNLFTHHEKTSSPVF
LLSNVSNEILDLPQLENNNNPDEIIIVIADPCPVSSSAGWLVRNVLAAVAQLHPSWTYCN
IISLRSAGSVGFKFSWVSSEGLQSGVPRSSGWEMHYSADLKKYFDPKIMMEESVDLNLKL
IKWRLNPDLELERYSNLKVLILGAGTIGCNLARGIVPWGVRHISFVDNSTVSYSNPVRQS
LSEFEDARLGRGKAETAVAALQRIFPSVQATAHRLTVPMPGHTIDEKEEEQLQKDIEKLE
QLVKDHDVVFLALDSREARWLPTVLACKHRKMAISVAIGFDTYVIIRHGIGSRKDSVSDD
SNSEAVPYSQLSCYFCSDVTAPGNSTSDRTLDQQCTVSRPGTSMIVSGLAVELLASVLQY
PNPLETPASLDDNTTLLGAAPHQIRGFLNRFQQIHPIVKRFERCVACGDSIADQYQQNGW
KFVRDVMNSPKRLEEVTGLDELQDSVDAIDIDFDDDESVVSN
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatttgttccgttcaagacatttcttgataccgcgttctggagggaagtaaat
aagaaaaaacttcatgattggaagctagacgagtcaccaaaagagatttacagtcaatta
tccctctatgacacgaaagggtcggagtgcgcgctttctttaagtcatgatagcttcacg
tcatcattagaagcctctaacggtttatcaatttctggaagtctcattttatacaatact
cgagaaagtttcaaagctgcagctaccacgaacagtagagaagagctaatggaattgaaa
acaactaaaatttgggatgctgttcaatctcgatcatggctgcaaaaccctcaactccta
aacacctttttcatcattgccttcgccgatctgaaaaaattccattacatctataaaact
tgtgtgccagctctaatcttccctaaagaaattcagcaagagattgttccgttgactgcc
tacaatgccaacgaatctaatttgttcactcatcatgagaagacatcttctccagtattt
ctgctctcaaatgtctcgaatgagattctagacctcccacaactggaaaataataataat
ccagacgagatcattattgtaatagcagatccatgccctgtttcttcatcagccggatgg
ttagtccgtaatgttctcgctgcggtagctcagcttcacccttcttggacatattgcaac
attattagtcttcgatcagctggcagcgttggtttcaagttctcatgggtgtcatccgaa
ggtcttcaaagcggagttccacgatcttctggatgggaaatgcattattcggctgatttg
aagaaatattttgatccaaaaatcatgatggaagaatcagtagatttgaatttgaagttg
atcaaatggaggttgaatccggatctcgaattggaacggtactcaaacttgaaggttctt
attctcggtgccggtactataggttgcaaccttgctcgtggtatcgttccatggggagtt
cgccatatttcgtttgtggacaactctactgtcagctacagtaatccagtacgacagagt
ttgtcggagttcgaagatgctcgattgggacgtggaaaagctgaaactgctgtggccgct
cttcaaagaatatttccgtcggttcaggcaactgctcatcgacttactgtcccgatgcct
ggacatacgattgacgaaaaggaggaagagcaattacagaaagatatcgagaaacttgag
caattagtaaaagatcacgatgtggttttcctcgctctggattcgagagaagctcgatgg
cttccaacagttctcgcatgcaaacacagaaaaatggctatcagcgttgctattggattc
gatacttacgttattattaggcatggaatcggatcgagaaaggatagtgtatctgacgat
tcgaattcggaagcagtcccttactctcaactctcgtgttatttctgcagtgatgtcact
gcccctggcaactcgacatctgatagaactctggaccaacagtgcactgtttctcgtcct
ggaacatcaatgatcgtgtctggattggctgtagagcttcttgcttcggttctacagtac
ccgaatcctcttgaaacaccagccagtcttgatgacaacactacacttcttggcgcagct
ccccaccaaatccgtggttttctcaatagattccaacaaattcatcctatcgtcaaacga
ttcgagcgatgcgttgcatgcggtgactcgatcgctgaccagtatcagcagaacggttgg
aagttcgtacgtgacgtcatgaactctccaaaacggctcgaagaagtaaccggactcgat
gagcttcaagattctgtcgacgccatcgacatcgattttgatgatgacgaatccgttgtc
tcaaactga
DBGET
integrated database retrieval system