Caenorhabditis remanei (nematode): GCK72_014064
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Entry
GCK72_014064 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GCK72_014064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crq03021
]
GCK72_014064
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_014064
Transcription machinery [BR:
crq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GCK72_014064
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
GCK72_014064
Chromatin remodeling factors
BAF complex
GCK72_014064
PBAF complex
GCK72_014064
GBAF(ncBAF) complex
GCK72_014064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
BRK
ResIII
HSA
QLQ
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
9828599
NCBI-ProteinID:
XP_053584897
UniProt:
A0A6A5GQ84
LinkDB
All DBs
Position
IV:<14471266..>14475930
Genome browser
AA seq
1356 aa
AA seq
DB search
MSGRGFEQSTALPEQIGEVTDYTVSSNLLATLSKLESVISTMEVRGLQNDPRHAKARSLK
QILQAGPPPSCSGSMSSNSSIGITELTPLQLKQLRAQVAAYRHLARNENVPDYLISSAVK
LPPKQTTLLPEPYKYPGEAENGEKLPYDLMKVLSIHQSRFNRQTELQVPPGVDPFKMLTQ
RENMIQNRIGLRMKSLSNLPADIPEHIRLKAEIELRALRLTNLQIHVRVDFESNVFQVSA
LDPAIYRRTKRQTLREARLTETLEKQLKMDQEKRRREKHSNLMHSIVQHFRDFKEYHRNN
AAKISKTQKAIKLHHQKYEAERKKDEARNEKLRMQKLMQEDEEGYRALLDEKKDQRLVYL
LQQTDEYVDSLCSLVRQHQTTEKKKKKDDKKFERSQMDDEARVHVREISTGKIITGDHAP
KPEEVEFWLETHPGYELIPRDQLSDDDEDDNETHVVEERVEEKDDQYAGMDDETKAKMII
EKARNEEDEYDQRTKKQMADYYATAHRIKEKIVKQHATMGGGNPNLQLKPYQLKGLEWMI
SLHNNNLNGILADEMGLGKTIQTISLITYLMEVKQNNGPYLVIVPLSTLSNWQSEFAKWA
PSVTAVIYKGTKDARRRVEAQIRKGAFNVLMTTYEYVIREKALLGKIRWKYMIIDEGHRL
KNHNCKLTVMLNAHFHAQHRILLTGTPLQNKLPELWALLNFLLPKIFSSCGTFEQWFNAP
FATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDMSALQKI
MYRSMKNGVLLDGKTSSGARSLMNTIVQLRKLCNHPFLFPTIEESCRTSWKVNHVGGLDL
MRVAGKLELLDRILPKLKATGHRVLMFFQMTSMMTIFEDYLNFRNHTYLRLDGSTKPDER
GDLLTLYNAPDSKYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQ
KKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEDIIRADG
EEEEDEELPDDESVNQMVARSEDEFNIFQDMDIARRREEAHQKNRKPRLLEEEEIPENLV
KLTCDYEEMEKAREEGREIVEETPNQRRRRKEIDYATDLMTEEQFMQRVEEIEDENERTI
AERKKQRKRKMAGLGENDDSMDDIVMQQKRIKPDIELQSKVNQMLAVILEYTDEDGEVIA
EPFQTLPTKRELPEYYKEISQPMDFDRINRKLQTGRYATIDEVNDDMILLVNNAQTFNEE
DSEIYDNSKIIARMWKEQYDKVKSASKPAVVIKQEPQSSHTVPSQKTNLGSPSEAPPLKR
IKREVHDEFMDEEQPSTSEYRAANRNPDERGDYDYE
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgggggttcgagcaatcaactgctctacccgagcaaattggggaagtgaca
gattatacagtgagcagtaatcttctagcgacactatcaaaattggagagcgtcatcagt
acaatggaagtgcgaggcctacagaatgacccccgacacgcgaaagcacgaagtttgaag
cagatacttcaagcaggaccacctccatcatgttctggcagtatgagttcaaacagttcc
ataggaatcaccgaactaacacctcttcaattaaagcagctaagagctcaagtcgcagca
taccgtcatttggctcgaaatgaaaacgtcccagattatttaatttccagtgctgttaaa
ctcccaccgaaacaaaccacgttactaccagagccatacaagtatcccggagaagctgaa
aatggagagaagctaccgtatgatttgatgaaggttctatcaattcatcaatctcgtttc
aatcgccaaacggaacttcaagtccctcctggagtcgatcctttcaaaatgttaactcaa
cgtgaaaacatgattcagaacagaattgggcttcgtatgaaatcactcagtaatcttccc
gctgatattccagagcatatacgattgaaggcggaaatcgaattacgtgcactacgattg
actaacttacaaattcatgtaagagtggatttcgaatcaaacgtatttcaagtttcagct
ctcgatcctgctatttatcgtcgcacaaaacgccagactcttcgcgaagctcgtctaact
gaaacattggaaaaacagctgaaaatggatcaagagaagaggagaagagagaaacattcc
aacttgatgcactctattgtacaacatttcagggactttaaggagtaccacagaaacaat
gcagctaaaatctctaaaacgcagaaggctatcaagcttcatcatcagaaatacgaggcg
gaacgcaagaaagatgaagctcgtaatgagaagcttcgtatgcaaaagcttatgcaagaa
gatgaagaaggatatcgtgcgcttctggatgagaaaaaagatcagcgccttgtgtacctt
cttcaacaaaccgatgaatatgttgattctctttgttcactggtccgtcaacatcaaaca
acagagaaaaagaaaaagaaggatgacaaaaagtttgaaagaagccaaatggacgacgaa
gcaagagttcatgtgagggagatcagcactggaaaaattattacaggtgatcatgctccg
aaacctgaagaagttgaattctggctggaaactcatccggggtacgagttgatcccacgt
gatcagctcagtgatgacgacgaagatgataatgagacacatgtcgttgaagaacgagta
gaagaaaaagacgatcagtatgctggaatggacgacgaaacaaaggcgaagatgataatt
gagaaagcaagaaatgaagaagacgaatatgatcaaagaacgaaaaagcaaatggccgac
tattatgcaacagctcacagaatcaaagaaaagattgttaaacaacacgctacaatgggt
ggtggtaatcctaatcttcaactgaaaccgtatcaactgaagggtttggaatggatgatt
tcgctacataacaataatttgaatggaattcttgccgacgaaatgggtttaggaaaaaca
attcaaaccatctcccttattacttacttgatggaagtgaagcaaaacaatggtccatac
ctcgtaattgtgccgttgtctactctttccaattggcagtccgaatttgccaaatgggca
ccatctgtgaccgcggtcatctacaaaggtacaaaagatgctcgtcgtcgagttgaagcc
cagatcagaaagggtgctttcaacgtgttgatgactacctacgaatacgtcatcagagaa
aaagcattacttggaaaaattcgctggaaatatatgatcatcgatgaaggtcatcgtctg
aaaaatcacaattgcaaacttaccgtcatgttaaatgcacatttccatgctcaacatcgc
attttgctcactggaacacctcttcaaaacaaacttcctgaactgtgggcacttctcaac
ttcttgcttccaaagattttttcatcttgtggaactttcgaacaatggtttaatgctcct
ttcgcaacgactggtgagaaagtggaattgaatcaagaagagactatgctgattatcaga
aggttgcacaaagtattgcgcccatttttgctgagacgtctcaaaaaagaagtggagtcg
cagctacctgacaaaactgaatatgttatcaaatgtgatatgtcagctcttcaaaagatt
atgtatcgatctatgaaaaatggagtactcctagatggtaaaacttcatctggagctcgt
tctttgatgaacaccattgttcaacttcgcaaactttgcaatcatccgttcctctttcca
accattgaggaatcatgtcgaacatcctggaaagtcaatcatgttggtggacttgatttg
atgcgagtggctggaaaattagaacttctcgatcgtattcttccaaaactcaaagcaacc
ggtcaccgtgtgcttatgtttttccaaatgacatctatgatgacaattttcgaggactac
ttaaacttcagaaatcatacatatctccgtctagatggttcaacgaaacccgatgaacgt
ggagacctactgactctgtacaacgcaccagatagcaaatactttcttttcatgctttca
accagagccggaggtcttggtctcaacttgcagaccgctgatactgtcattattttcgat
tcggattggaatcctcatcaggatatgcaggcgcaggatcgagctcatcgtattggtcag
aagaaggaagttcgagtacttcgtctaatcacagccaactctgtcgaagaaaagattctt
gccgcagctcgatataagttgaacgtcgatgagaaagtcattcaagcaggaaagttcgat
caacgttcgactggagctgaaaggaagcaaatgcttgaagatatcattcgggcagacggc
gaggaggaagaagatgaggaacttccagacgatgagtctgtaaatcagatggtcgcacgt
tctgaagacgaattcaacatttttcaagatatggatatcgctcgtcgacgtgaagaagct
catcaaaaaaacaggaagccacgtctcctagaagaagaagaaattcctgagaacctagtg
aaactgacatgcgattatgaagaaatggaaaaagctagggaagaaggtcgagagattgtc
gaagaaactccaaatcagagaagacgacgcaaagagattgactacgctaccgatctgatg
actgaagagcagtttatgcaacgtgttgaagagattgaagatgagaatgagcggactatc
gccgaaagaaaaaaacaacggaagagaaaaatggccggactcggtgaaaacgacgactca
atggacgacattgtcatgcagcagaaaaggataaaaccagatattgagttgcaaagcaaa
gtcaaccaaatgttggcagttattttggaatacaccgatgaggacggggaagttatcgcg
gaacctttccaaactctcccaactaaaagagagcttcctgagtactataaggaaatttca
cagccaatggattttgatcgcatcaacagaaaacttcaaactggacgatacgcaacaata
gacgaagtaaatgatgatatgatattgctagttaacaatgcgcaaacgttcaatgaagag
gacagtgaaatttatgataactccaaaattatagcaaggatgtggaaggaacagtatgat
aaagtcaaaagtgcatcgaagccagcagtggttatcaaacaagaaccacaaagttcgcac
actgtcccttcgcaaaaaactaatttaggatctcccagtgaagctcccccacttaaaaga
atcaagcgggaagtacatgatgagttcatggacgaagaacagccttcaacgtcggagtac
cgtgcagctaatcgaaatccggatgaacgcggtgattatgactacgagtga
DBGET
integrated database retrieval system