KEGG   Caenorhabditis remanei (nematode): GCK72_014064
Entry
GCK72_014064      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    GCK72_014064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crq03021]
    GCK72_014064
   03036 Chromosome and associated proteins [BR:crq03036]
    GCK72_014064
Transcription machinery [BR:crq03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     GCK72_014064
Chromosome and associated proteins [BR:crq03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     GCK72_014064
  Chromatin remodeling factors
   BAF complex
    GCK72_014064
   PBAF complex
    GCK72_014064
   GBAF(ncBAF) complex
    GCK72_014064
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C Bromodomain BRK ResIII HSA QLQ DEAD HDA2-3
Other DBs
NCBI-GeneID: 9828599
NCBI-ProteinID: XP_053584897
UniProt: A0A6A5GQ84
LinkDB
Position
IV:<14471266..>14475930
AA seq 1356 aa
MSGRGFEQSTALPEQIGEVTDYTVSSNLLATLSKLESVISTMEVRGLQNDPRHAKARSLK
QILQAGPPPSCSGSMSSNSSIGITELTPLQLKQLRAQVAAYRHLARNENVPDYLISSAVK
LPPKQTTLLPEPYKYPGEAENGEKLPYDLMKVLSIHQSRFNRQTELQVPPGVDPFKMLTQ
RENMIQNRIGLRMKSLSNLPADIPEHIRLKAEIELRALRLTNLQIHVRVDFESNVFQVSA
LDPAIYRRTKRQTLREARLTETLEKQLKMDQEKRRREKHSNLMHSIVQHFRDFKEYHRNN
AAKISKTQKAIKLHHQKYEAERKKDEARNEKLRMQKLMQEDEEGYRALLDEKKDQRLVYL
LQQTDEYVDSLCSLVRQHQTTEKKKKKDDKKFERSQMDDEARVHVREISTGKIITGDHAP
KPEEVEFWLETHPGYELIPRDQLSDDDEDDNETHVVEERVEEKDDQYAGMDDETKAKMII
EKARNEEDEYDQRTKKQMADYYATAHRIKEKIVKQHATMGGGNPNLQLKPYQLKGLEWMI
SLHNNNLNGILADEMGLGKTIQTISLITYLMEVKQNNGPYLVIVPLSTLSNWQSEFAKWA
PSVTAVIYKGTKDARRRVEAQIRKGAFNVLMTTYEYVIREKALLGKIRWKYMIIDEGHRL
KNHNCKLTVMLNAHFHAQHRILLTGTPLQNKLPELWALLNFLLPKIFSSCGTFEQWFNAP
FATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDMSALQKI
MYRSMKNGVLLDGKTSSGARSLMNTIVQLRKLCNHPFLFPTIEESCRTSWKVNHVGGLDL
MRVAGKLELLDRILPKLKATGHRVLMFFQMTSMMTIFEDYLNFRNHTYLRLDGSTKPDER
GDLLTLYNAPDSKYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQ
KKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEDIIRADG
EEEEDEELPDDESVNQMVARSEDEFNIFQDMDIARRREEAHQKNRKPRLLEEEEIPENLV
KLTCDYEEMEKAREEGREIVEETPNQRRRRKEIDYATDLMTEEQFMQRVEEIEDENERTI
AERKKQRKRKMAGLGENDDSMDDIVMQQKRIKPDIELQSKVNQMLAVILEYTDEDGEVIA
EPFQTLPTKRELPEYYKEISQPMDFDRINRKLQTGRYATIDEVNDDMILLVNNAQTFNEE
DSEIYDNSKIIARMWKEQYDKVKSASKPAVVIKQEPQSSHTVPSQKTNLGSPSEAPPLKR
IKREVHDEFMDEEQPSTSEYRAANRNPDERGDYDYE
NT seq 4071 nt   +upstreamnt  +downstreamnt
atgagtggccgggggttcgagcaatcaactgctctacccgagcaaattggggaagtgaca
gattatacagtgagcagtaatcttctagcgacactatcaaaattggagagcgtcatcagt
acaatggaagtgcgaggcctacagaatgacccccgacacgcgaaagcacgaagtttgaag
cagatacttcaagcaggaccacctccatcatgttctggcagtatgagttcaaacagttcc
ataggaatcaccgaactaacacctcttcaattaaagcagctaagagctcaagtcgcagca
taccgtcatttggctcgaaatgaaaacgtcccagattatttaatttccagtgctgttaaa
ctcccaccgaaacaaaccacgttactaccagagccatacaagtatcccggagaagctgaa
aatggagagaagctaccgtatgatttgatgaaggttctatcaattcatcaatctcgtttc
aatcgccaaacggaacttcaagtccctcctggagtcgatcctttcaaaatgttaactcaa
cgtgaaaacatgattcagaacagaattgggcttcgtatgaaatcactcagtaatcttccc
gctgatattccagagcatatacgattgaaggcggaaatcgaattacgtgcactacgattg
actaacttacaaattcatgtaagagtggatttcgaatcaaacgtatttcaagtttcagct
ctcgatcctgctatttatcgtcgcacaaaacgccagactcttcgcgaagctcgtctaact
gaaacattggaaaaacagctgaaaatggatcaagagaagaggagaagagagaaacattcc
aacttgatgcactctattgtacaacatttcagggactttaaggagtaccacagaaacaat
gcagctaaaatctctaaaacgcagaaggctatcaagcttcatcatcagaaatacgaggcg
gaacgcaagaaagatgaagctcgtaatgagaagcttcgtatgcaaaagcttatgcaagaa
gatgaagaaggatatcgtgcgcttctggatgagaaaaaagatcagcgccttgtgtacctt
cttcaacaaaccgatgaatatgttgattctctttgttcactggtccgtcaacatcaaaca
acagagaaaaagaaaaagaaggatgacaaaaagtttgaaagaagccaaatggacgacgaa
gcaagagttcatgtgagggagatcagcactggaaaaattattacaggtgatcatgctccg
aaacctgaagaagttgaattctggctggaaactcatccggggtacgagttgatcccacgt
gatcagctcagtgatgacgacgaagatgataatgagacacatgtcgttgaagaacgagta
gaagaaaaagacgatcagtatgctggaatggacgacgaaacaaaggcgaagatgataatt
gagaaagcaagaaatgaagaagacgaatatgatcaaagaacgaaaaagcaaatggccgac
tattatgcaacagctcacagaatcaaagaaaagattgttaaacaacacgctacaatgggt
ggtggtaatcctaatcttcaactgaaaccgtatcaactgaagggtttggaatggatgatt
tcgctacataacaataatttgaatggaattcttgccgacgaaatgggtttaggaaaaaca
attcaaaccatctcccttattacttacttgatggaagtgaagcaaaacaatggtccatac
ctcgtaattgtgccgttgtctactctttccaattggcagtccgaatttgccaaatgggca
ccatctgtgaccgcggtcatctacaaaggtacaaaagatgctcgtcgtcgagttgaagcc
cagatcagaaagggtgctttcaacgtgttgatgactacctacgaatacgtcatcagagaa
aaagcattacttggaaaaattcgctggaaatatatgatcatcgatgaaggtcatcgtctg
aaaaatcacaattgcaaacttaccgtcatgttaaatgcacatttccatgctcaacatcgc
attttgctcactggaacacctcttcaaaacaaacttcctgaactgtgggcacttctcaac
ttcttgcttccaaagattttttcatcttgtggaactttcgaacaatggtttaatgctcct
ttcgcaacgactggtgagaaagtggaattgaatcaagaagagactatgctgattatcaga
aggttgcacaaagtattgcgcccatttttgctgagacgtctcaaaaaagaagtggagtcg
cagctacctgacaaaactgaatatgttatcaaatgtgatatgtcagctcttcaaaagatt
atgtatcgatctatgaaaaatggagtactcctagatggtaaaacttcatctggagctcgt
tctttgatgaacaccattgttcaacttcgcaaactttgcaatcatccgttcctctttcca
accattgaggaatcatgtcgaacatcctggaaagtcaatcatgttggtggacttgatttg
atgcgagtggctggaaaattagaacttctcgatcgtattcttccaaaactcaaagcaacc
ggtcaccgtgtgcttatgtttttccaaatgacatctatgatgacaattttcgaggactac
ttaaacttcagaaatcatacatatctccgtctagatggttcaacgaaacccgatgaacgt
ggagacctactgactctgtacaacgcaccagatagcaaatactttcttttcatgctttca
accagagccggaggtcttggtctcaacttgcagaccgctgatactgtcattattttcgat
tcggattggaatcctcatcaggatatgcaggcgcaggatcgagctcatcgtattggtcag
aagaaggaagttcgagtacttcgtctaatcacagccaactctgtcgaagaaaagattctt
gccgcagctcgatataagttgaacgtcgatgagaaagtcattcaagcaggaaagttcgat
caacgttcgactggagctgaaaggaagcaaatgcttgaagatatcattcgggcagacggc
gaggaggaagaagatgaggaacttccagacgatgagtctgtaaatcagatggtcgcacgt
tctgaagacgaattcaacatttttcaagatatggatatcgctcgtcgacgtgaagaagct
catcaaaaaaacaggaagccacgtctcctagaagaagaagaaattcctgagaacctagtg
aaactgacatgcgattatgaagaaatggaaaaagctagggaagaaggtcgagagattgtc
gaagaaactccaaatcagagaagacgacgcaaagagattgactacgctaccgatctgatg
actgaagagcagtttatgcaacgtgttgaagagattgaagatgagaatgagcggactatc
gccgaaagaaaaaaacaacggaagagaaaaatggccggactcggtgaaaacgacgactca
atggacgacattgtcatgcagcagaaaaggataaaaccagatattgagttgcaaagcaaa
gtcaaccaaatgttggcagttattttggaatacaccgatgaggacggggaagttatcgcg
gaacctttccaaactctcccaactaaaagagagcttcctgagtactataaggaaatttca
cagccaatggattttgatcgcatcaacagaaaacttcaaactggacgatacgcaacaata
gacgaagtaaatgatgatatgatattgctagttaacaatgcgcaaacgttcaatgaagag
gacagtgaaatttatgataactccaaaattatagcaaggatgtggaaggaacagtatgat
aaagtcaaaagtgcatcgaagccagcagtggttatcaaacaagaaccacaaagttcgcac
actgtcccttcgcaaaaaactaatttaggatctcccagtgaagctcccccacttaaaaga
atcaagcgggaagtacatgatgagttcatggacgaagaacagccttcaacgtcggagtac
cgtgcagctaatcgaaatccggatgaacgcggtgattatgactacgagtga

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