Caenorhabditis remanei (nematode): GCK72_014418
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Entry
GCK72_014418 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00280
Valine, leucine and isoleucine degradation
crq01100
Metabolic pathways
Module
crq_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GCK72_014418
Enzymes [BR:
crq01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
GCK72_014418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_3
ATPgrasp_ST
GARS_A
RimK
NQRA_N
PPV_E2_N
Motif
Other DBs
NCBI-GeneID:
9798192
NCBI-ProteinID:
XP_053585048
UniProt:
A0A6A5GRD4
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All DBs
Position
IV:complement(15856778..15859215)
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AA seq
671 aa
AA seq
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MLRAVQKRCASTAPLIRPIQRVLVANRGEIAIRVQNTARKMGIETVAVFSDADRNSLFVK
KADKAFHIGPPLAAESYLNMDKIINTAIRSGAQAIHPGYGFLSENAGFADKCAQAGLVFI
GPPAQAIRDMGAKNVSKQIMEDAKVPVVKGFHGEDQSDANLKKKSQEIGYPVMLKAVYGG
GGKGMRIAWNEAEFDEKLASARNEAKKSFGNDEMLVEKFVEKPRHVEVQVFGDHHGNYVH
LWERDCSVQRRHQKIIEEAPAPNMAHETRLKLGESAVRAAAAVGYVGAGTVEFIMDPRGE
FFFMEMNTRLQVEHPVSEAITGTDLVEWQLRVAQGEKLPLKQSEIPLNGHSFECRVYAED
TRKGAFMPTAGRLNYVDFPEDARIDTGVVSGDEVSIHYDPMIAKVVVWGKDRNVAAAKLE
SALARTRISGLPTNIDFVRRVLAHPEFAAGNVYTDFIPDHHEELFAESETPAEIYVESAI
AHALSALKKSDAGVFQNLSFFRINVAPKYVFKIDGKDVTVRFDSENRLTVSYDGNSYETL
LNDIEAIGDNEFKFTLEANGRRWSTVVKDLPETLMVNGVGQNEYATPAVYEAFDSLAGGA
ASHSAVAPMPGIIEKILVKPGDQVTTGQALVVMTAMKMEYIIRAPEDSTIEHIKCQAGKN
VPKNAVLVQFA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgccgtgcagaagcgatgtgcctcaacagctcctctgatccgtccgatccaa
cgggttctggtagcaaatcgaggagaaattgccattcgggttcaaaacacagctcgcaaa
atgggtatcgaaaccgtggccgtcttttcagatgcagatcgtaattcacttttcgtcaaa
aaagccgacaaggctttccatatcggaccaccacttgccgctgaaagttatctcaacatg
gacaaaataattaacacagcgattcgctctggagcccaagctattcacccgggatacggt
ttcttatctgaaaacgctggttttgctgacaaatgtgctcaagccggccttgtattcatt
ggaccgcctgctcaagctatcagagatatgggagcgaaaaatgtttcaaaacaaatcatg
gaagatgccaaagttccagtagttaaaggtttccacggagaagatcaatctgatgctaat
ctgaaaaagaagtcacaagaaattgggtacccagtgatgttgaaagccgtttatggaggt
ggtggaaaaggaatgagaatcgcctggaatgaagctgagttcgatgagaaacttgcgtca
gctcgtaatgaagccaagaaatcatttggcaacgatgaaatgctcgttgagaagtttgtt
gagaaaccaagacacgtcgaagtgcaagttttcggagatcatcatggaaactatgttcat
ttgtgggaaagagattgttctgtccaaagacgtcatcagaaaatcattgaagaagcacca
gccccgaatatggctcatgaaacgcgtctcaaacttggagaatctgctgtccgtgcagct
gctgctgttggatatgttggagcaggaactgttgagttcattatggatccacgtggagag
tttttcttcatggaaatgaacactcgtcttcaagtagagcatccagtcagtgaggccatc
acagggaccgacttggttgaatggcaacttcgtgtcgctcaaggagagaaacttccactg
aaacagtctgaaatcccattgaatggacattctttcgaatgtcgtgtctatgctgaagat
acccgtaaaggagctttcatgccaaccgctggtcgactcaactatgttgatttccctgaa
gatgctagaattgatactggagttgtttccggagacgaagtatctattcattatgacccc
atgattgcaaaggttgtcgtttggggaaaggaccgtaatgttgctgctgctaaattggaa
agtgctcttgcccgtacacgaatttctggtcttccaaccaacattgatttcgttcgtcgt
gttctcgctcatccggaattcgctgctggaaatgtctacactgatttcattccggaccac
cacgaggagcttttcgctgaatctgaaacgccagccgagatctatgttgaatcggcgatt
gctcacgcattgtccgctctcaagaaatcggatgcaggtgttttccaaaacctgtccttc
ttcagaatcaacgtagctccaaaatacgtgttcaaaatcgatggtaaagatgtgactgtt
cgttttgattccgaaaaccgtcttaccgtctcttacgatggaaacagttatgaaacactt
ctgaatgacattgaagcgattggagataacgagttcaagtttactctagaagccaatggc
agacggtggagtacagtagtcaaagatctcccagaaacattaatggtgaatggagttggt
caaaacgagtatgcaacaccagcagtgtatgaagcattcgactcattggctggaggagcc
gccagtcattcggcagtggctccaatgccaggaattatcgagaaaattctggtcaaacca
ggagatcaagttacaactggacaagcactagttgttatgacagcaatgaaaatggaatac
atcatccgtgctcctgaagattcaacgatcgaacacatcaagtgtcaagctggaaagaat
gttcctaaaaatgccgttttagtgcaattcgcctaa
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