KEGG   Caenorhabditis remanei (nematode): GCK72_014516
Entry
GCK72_014516      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K14791  periodic tryptophan protein 1
Organism
crq  Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:crq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crq03009]
    GCK72_014516
Ribosome biogenesis [BR:crq03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    GCK72_014516
  Pre-60S particles
   Other pre-60S particles
    GCK72_014516
SSDB
Motif
Pfam: WD40_CDC20-Fz SAC3_GANP WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40 WD40_WDHD1_1st EIF3I Beta-prop_EIPR1 WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_TEP1_C PALB2_WD40
Other DBs
NCBI-GeneID: 9798835
NCBI-ProteinID: XP_053585094
UniProt: A0A6A5GRH7
LinkDB
Position
IV:complement(16226705..16229673)
AA seq 637 aa
MATCESMCPSTEVKFRSKNGLINQLEATASSRNGPRSKYVADPQKMVKEYSRSAADTHKY
NKPDLLRPFPVLMRTVDYLLELYYALGIRQDMVMQNLDGKSTVILMEKMLPFYIETDGLC
KMMVVPSYNPKLHDFQLEECFGRWHDEIKSSGDITPNSLISAAFFFRQLHQMEGVLMVSD
LSWIQRGVAKEIPDKIKLNDEELKKLIEGAIPESTDNDTDGEDGEEESDHEKPKGIRGKD
VEMKDEESEFEKKYMQGYNEKETDEEAGEDGMKGIAMYSTNKEDPYVTEQVDSDEEEEKE
EIMVRKDDNMVAVAKIDKGDYTLECYVYNEADSDWFCHHDYILDAPPLCIEPVQHDPGNE
ETGKGNLIAVGTMNSEIHIWDLDIMNTASPFLTLGKKEKKSKGGRKKRDNSAQGHTDAVI
SLAWNKLTPHVLASGGADKTVVLWDLDEAKPAQIIPDRGGEVQTVRWHPNESTFLLLGTM
KGHVQVVDCRDTTGNASAAWKFDGQIEKVLWNHFNPFTVFVSSDDGRLRHLDLRKPGECI
WEGVAHDGPIGGLTMSAITRGLLVTVGEDEMMNVWKVEDSNGGIEKVHSEKLTIGELHCA
QFNPDVAAVLSVGGTTADLIRVIDLTKYEPVVKAFSE
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggcaacatgtgagagtatgtgcccatctacagaagtcaagttccgcagtaaaaacggg
cttataaatcaattagaagcaacggcttcctctcgaaatgggccccgatccaaatacgtg
gcagatcctcagaaaatggtgaaagaatactcgcgatcagctgctgacacacacaaatac
aataaacccgatttattgagaccgtttccagtcttgatgcgtacagtggactatctattg
gaattatactatgcacttggaataaggcaggatatggtaatgcaaaacttggacggaaag
agcacagtcattcttatggagaaaatgctgccgttctacattgagactgatgggctttgc
aaaatgatggtcgtacctagctataatccgaagttgcatgattttcagctggaagaatgc
tttggccgatggcatgacgaaatcaaatcgtcaggagacattactcctaattcgttgata
tctgctgctttcttcttcagacaactgcatcaaatggagggtgttttgatggtgtcggat
ctctcctggatccaacgaggagttgcgaaggaaattccagacaaaatcaagttgaacgac
gaagaactgaaaaaacttattgagggagccattcccgaatcaactgataatgatacagat
ggtgaagatggagaggaagaatccgatcatgaaaaaccgaaaggaatccgtggaaaagat
gtcgaaatgaaggatgaagaatcagagttcgagaaaaagtatatgcaaggatacaacgag
aaagagactgatgaagaagcaggtgaagatggtatgaaaggtattgccatgtattcaacc
aacaaagaggatccttacgtgacggagcaagttgattctgatgaggaggaggaaaaagaa
gagattatggtgcgaaaagacgacaacatggttgctgtcgccaagattgataaaggagac
tatacgctagaatgctacgtgtataacgaggcagatagtgattggttctgccatcatgac
tacatcctggatgctcctcctctctgtattgagcccgttcaacacgatcctggaaatgaa
gaaactggaaaaggaaacttgattgctgtaggaacgatgaactctgaaattcatatctgg
gatctcgatatcatgaacacagcgagtccattcttgacccttggtaaaaaagagaagaag
tcgaaaggtggcagaaaaaagagggataacagtgctcaaggccatacggatgctgtaatc
tcgctcgcttggaacaaactaacaccccacgtactcgccagtggtggagccgacaaaact
gttgttctttgggatttagatgaggccaagccagcacaaataattcctgatcgtggagga
gaagttcaaactgttagatggcatccaaatgagtcaacattcttgttactgggaacaatg
aaaggacatgttcaagttgtcgactgtcgggatactactggaaatgcatccgctgcatgg
aagtttgatggacaaatcgaaaaagttctctggaatcatttcaatccattcactgttttt
gtttcttctgatgatggaagattgcgtcatttggacttgagaaaaccaggagagtgtatt
tgggaaggagtcgctcacgatggaccaattggaggtctcacaatgtcagcaattacaaga
ggacttttggtgactgttggagaagacgaaatgatgaacgtatggaaagtagaagactca
aacggaggtatcgaaaaagttcattcagagaagctcacaatcggagagcttcattgtgcc
cagtttaatccagacgtagctgctgtgttatccgtcggcggaactactgctgatttaatt
cgggtcattgatcttaccaaatacgagccggtcgtgaaagctttctctgaataa

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