Caenorhabditis remanei (nematode): GCK72_014516
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Entry
GCK72_014516 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14791
periodic tryptophan protein 1
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_014516
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
90S particles
Other 90S particles
GCK72_014516
Pre-60S particles
Other pre-60S particles
GCK72_014516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
SAC3_GANP
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_TEP1_C
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
9798835
NCBI-ProteinID:
XP_053585094
UniProt:
A0A6A5GRH7
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All DBs
Position
IV:complement(16226705..16229673)
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AA seq
637 aa
AA seq
DB search
MATCESMCPSTEVKFRSKNGLINQLEATASSRNGPRSKYVADPQKMVKEYSRSAADTHKY
NKPDLLRPFPVLMRTVDYLLELYYALGIRQDMVMQNLDGKSTVILMEKMLPFYIETDGLC
KMMVVPSYNPKLHDFQLEECFGRWHDEIKSSGDITPNSLISAAFFFRQLHQMEGVLMVSD
LSWIQRGVAKEIPDKIKLNDEELKKLIEGAIPESTDNDTDGEDGEEESDHEKPKGIRGKD
VEMKDEESEFEKKYMQGYNEKETDEEAGEDGMKGIAMYSTNKEDPYVTEQVDSDEEEEKE
EIMVRKDDNMVAVAKIDKGDYTLECYVYNEADSDWFCHHDYILDAPPLCIEPVQHDPGNE
ETGKGNLIAVGTMNSEIHIWDLDIMNTASPFLTLGKKEKKSKGGRKKRDNSAQGHTDAVI
SLAWNKLTPHVLASGGADKTVVLWDLDEAKPAQIIPDRGGEVQTVRWHPNESTFLLLGTM
KGHVQVVDCRDTTGNASAAWKFDGQIEKVLWNHFNPFTVFVSSDDGRLRHLDLRKPGECI
WEGVAHDGPIGGLTMSAITRGLLVTVGEDEMMNVWKVEDSNGGIEKVHSEKLTIGELHCA
QFNPDVAAVLSVGGTTADLIRVIDLTKYEPVVKAFSE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatgtgagagtatgtgcccatctacagaagtcaagttccgcagtaaaaacggg
cttataaatcaattagaagcaacggcttcctctcgaaatgggccccgatccaaatacgtg
gcagatcctcagaaaatggtgaaagaatactcgcgatcagctgctgacacacacaaatac
aataaacccgatttattgagaccgtttccagtcttgatgcgtacagtggactatctattg
gaattatactatgcacttggaataaggcaggatatggtaatgcaaaacttggacggaaag
agcacagtcattcttatggagaaaatgctgccgttctacattgagactgatgggctttgc
aaaatgatggtcgtacctagctataatccgaagttgcatgattttcagctggaagaatgc
tttggccgatggcatgacgaaatcaaatcgtcaggagacattactcctaattcgttgata
tctgctgctttcttcttcagacaactgcatcaaatggagggtgttttgatggtgtcggat
ctctcctggatccaacgaggagttgcgaaggaaattccagacaaaatcaagttgaacgac
gaagaactgaaaaaacttattgagggagccattcccgaatcaactgataatgatacagat
ggtgaagatggagaggaagaatccgatcatgaaaaaccgaaaggaatccgtggaaaagat
gtcgaaatgaaggatgaagaatcagagttcgagaaaaagtatatgcaaggatacaacgag
aaagagactgatgaagaagcaggtgaagatggtatgaaaggtattgccatgtattcaacc
aacaaagaggatccttacgtgacggagcaagttgattctgatgaggaggaggaaaaagaa
gagattatggtgcgaaaagacgacaacatggttgctgtcgccaagattgataaaggagac
tatacgctagaatgctacgtgtataacgaggcagatagtgattggttctgccatcatgac
tacatcctggatgctcctcctctctgtattgagcccgttcaacacgatcctggaaatgaa
gaaactggaaaaggaaacttgattgctgtaggaacgatgaactctgaaattcatatctgg
gatctcgatatcatgaacacagcgagtccattcttgacccttggtaaaaaagagaagaag
tcgaaaggtggcagaaaaaagagggataacagtgctcaaggccatacggatgctgtaatc
tcgctcgcttggaacaaactaacaccccacgtactcgccagtggtggagccgacaaaact
gttgttctttgggatttagatgaggccaagccagcacaaataattcctgatcgtggagga
gaagttcaaactgttagatggcatccaaatgagtcaacattcttgttactgggaacaatg
aaaggacatgttcaagttgtcgactgtcgggatactactggaaatgcatccgctgcatgg
aagtttgatggacaaatcgaaaaagttctctggaatcatttcaatccattcactgttttt
gtttcttctgatgatggaagattgcgtcatttggacttgagaaaaccaggagagtgtatt
tgggaaggagtcgctcacgatggaccaattggaggtctcacaatgtcagcaattacaaga
ggacttttggtgactgttggagaagacgaaatgatgaacgtatggaaagtagaagactca
aacggaggtatcgaaaaagttcattcagagaagctcacaatcggagagcttcattgtgcc
cagtttaatccagacgtagctgctgtgttatccgtcggcggaactactgctgatttaatt
cgggtcattgatcttaccaaatacgagccggtcgtgaaagctttctctgaataa
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