Caenorhabditis remanei (nematode): GCK72_014580
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Entry
GCK72_014580 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crq03016
]
GCK72_014580
Enzymes [BR:
crq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GCK72_014580
Transfer RNA biogenesis [BR:
crq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GCK72_014580
Prokaryotic type
GCK72_014580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
DUF4502
Motif
Other DBs
NCBI-GeneID:
9828967
NCBI-ProteinID:
XP_003108315
UniProt:
E3M645
LinkDB
All DBs
Position
IV:<16389975..>16392862
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AA seq
831 aa
AA seq
DB search
MRRAVSRIVENRTLLTRFFSSTSPLFNNEDLIESIRERIARNRRILQKHSSSHLKAREVN
ASISNLRQSMASVQKKQKAAHEPPANSIVNIPSQVSIEVLGNGTGLLRACFILRTPLKTY
MFNCPENACRFLWQLRIRSSSVVDLFITSANWDNIAGISSILLSKESNAMSTRLHGAMNI
KHFLECIRPFQDSDYGNCKYPSQVEERPYTMESYEDAGMKVTYIPLSPPLGLKNKEKNSK
VNNVDVAFLIEMKEAARRIDAVKLMELKVPKGPLIGKLKSGEAVTLPDGRTIQPDQVFSS
HKVEGEKPILLVAECTTEEHVESLLNSSSMQPFFNNEKRLDYMVHLSKEELINTPSYKTL
MNKLSDGDTTHLLINEANPVIPAVESVYKHTRLLRSISPSLFPALHPIDWSGIISQNEEL
SQKENEFIRVAPLQRYWMRKGNSLNEEPIINNLLASEPELTEKAKQLVTDFQKLEASIEK
NCEFPKITFFGTSSAVPSKYRNVTGYLVEASNESALLLDVGEGTYGQMKAVFGEEGCKKL
LVNLHCVLVTHAHQDHMNGLYTIVARRKEAFESLRIPYRPLVLVCNRNVLKPLKTYSICF
ENIENLLEIVDISRHPLTPPGSPNGPPGKRPRLPSPHLPPSRDILDDMPKSFDKNVWKLE
ELKAVQVHHTRMANGFVMRVAGKRIVFSGDTKPCDLLVAEGQDADVLVHESTFEDGHEED
ALRKRHSTMGQAVDVGKRMNAKNIILTHFSARYPKVPVLPQYLDTENIGVAMDMLRVRFD
HLPLVSKLLPIYREVFVAELFELTIKKEQRILKDKESSEKKQQKRSVKQSS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgagcagtatcaagaatcgtagaaaatcggactctactcacccgttttttctct
tcgactagccctttgttcaataacgaagacttgatcgaaagcatccgagaacggatcgct
aggaatcgacgcattcttcagaaacactcttcatctcatctgaaagcgcgagaagtaaac
gccagcatttctaatctccgtcaatcgatggcttctgttcagaaaaaacaaaaggcggct
catgaacctccagccaattcaattgtcaacattcccagtcaagtgtctatcgaagttctc
ggaaatggaacaggattgcttcgagcttgtttcattcttcggacacctttaaaaacgtac
atgttcaactgtccagagaacgcgtgcagatttttatggcaactccgaattcgtagttcc
agtgtcgtcgatctttttatcacgtctgcgaattgggacaacattgctggtatctcatcg
atcctactttcgaaagaatcaaacgcaatgtcaactcgacttcatggagcaatgaatatc
aaacactttctagagtgtatccgtccatttcaagattccgattatggtaattgtaaatat
ccttcccaggtggaagagcggccgtacactatggaaagttacgaagatgctggaatgaaa
gtcacttatatcccactgagtccaccattgggattgaaaaataaagagaaaaatagtaaa
gtcaacaatgtggatgttgcatttttaattgagatgaaagaagctgcacgacgaattgac
gctgttaagctgatggaacttaaagtaccgaaaggtcctctaatcggaaaactgaaatct
ggagaagctgttactctaccagacggaagaacgattcaaccggatcaagtgttttcgtct
cataaagtcgaaggagagaaaccgattcttctggtagcagaatgtacaactgaagagcat
gtagaatcacttttgaattcttcgtctatgcaaccgttttttaacaatgagaaacggtta
gactacatggtccatctcagcaaagaagaattaattaatactccttcctacaaaactctg
atgaacaaattgagtgatggggacacaactcatctcctgatcaatgaagccaacccagtg
attcctgctgttgaaagtgtatacaagcacactcgtcttctccgatcgatttcaccgtct
ctgtttcctgcacttcatccaattgattggagcggaattatctctcaaaatgaagagctg
tcccagaaagaaaatgaatttatcagggttgctccactacaacggtattggatgagaaag
ggaaattcattgaatgaggaaccaattatcaataacttgttggcttcagaaccagaactg
acagagaaagcaaaacaattagtcacagattttcaaaaattagaagcgagcattgaaaaa
aattgtgaatttccaaaaatcacattttttggtacatcatctgctgttccatcgaagtat
cggaatgtgaccggttatttggtggaagcttcaaacgaaagtgcattgctccttgatgtt
ggtgaaggaacatatggacaaatgaaagctgttttcggagaagaaggttgcaagaaactg
ttagtaaatcttcattgcgttcttgtcacccatgctcatcaggaccacatgaatggattg
tacactattgttgctagaagaaaggaggcatttgagtcgctgagaatcccttatcggcca
ctcgtgcttgtctgcaataggaacgtactgaaacctctcaaaacatactccatttgtttc
gaaaacatcgaaaatcttctagaaatcgtggatatatccagacatcctttaactcctcca
ggaagtcccaatggcccacctggaaaaaggccaagactcccaagtcctcaccttcctcct
agcagagatattttggatgatatgccaaaaagttttgacaaaaatgtttggaagttggag
gaattaaaagctgttcaagtacatcacactagaatggcaaatggatttgtgatgcgtgtt
gctggaaaaagaattgtgttttctggagatactaaaccttgtgatttattggtcgcagaa
ggacaagatgccgatgtgcttgttcacgagtctacattcgaagatggacatgaagaagat
gccttgcggaaacgtcattcgacgatgggccaggcggttgatgtcggaaagcgaatgaat
gcgaaaaatattattttaacgcattttagtgcaagatatcccaaagtcccagtactccca
caatatcttgatacagaaaacattggagttgctatggatatgctcagagtccgtttcgat
catttgccacttgtttctaaattgctcccaatctacagagaagtgtttgttgccgagttg
ttcgagttgacaatcaagaaagagcaacgtatcctgaaagataaggaatcttctgagaag
aaacagcagaaaagatctgttaagcaatccagttga
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