Caenorhabditis remanei (nematode): GCK72_015410
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Entry
GCK72_015410 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crq03009
]
GCK72_015410
Enzymes [BR:
crq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GCK72_015410
Ribosome biogenesis [BR:
crq03009
]
Eukaryotic type
Pre-60S particles
Helicases
GCK72_015410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Cas3-like_C_2
TT_ORF2-like
Motif
Other DBs
NCBI-GeneID:
9828137
NCBI-ProteinID:
XP_053585620
UniProt:
A0A6A5GU01
LinkDB
All DBs
Position
IV:20625932..20638018
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AA seq
829 aa
AA seq
DB search
MASDDEEDFKQLQISQNRKHKKAGGWQQLGLDHSIFKAIEKKGFNQPTPIQRKTIPCIMD
GKDVVAMSRTGSGKTAAFVIPMLQKLKGRDTKGIRALMVSPTRELALQTFKVVKELGRFT
GLRCACLVGGDVLEDQFSTIHENPDILLATPGRLLHVIVEMDLRLSFVNYVVFDEADRLF
EMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKVSEKLSM
VFCMCRPEEKLFALLHLCRRMDRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLD
ATARKQNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPSKAKLFVHRVGRVARAG
RSGTAISLIANDELPYLTDLFMFLGKPINFASDASEYKEDETLIGRVPDSIVSLETEFFN
SIHDNNEEMLDLRQKATNAMMKYTRTRQPPSAESARRVKQDIRTDSVECAPHPFLKAEGD
KQSHDILNRLSQYKSRNTIFEMNKSQKSQALAVMQAKRKAHEPRISTVTEEKRKQKEERE
QRDAEKSVEGEREQGDADIIGVDEGELEAVFGTVIGSTKHNETSEEKKKQKSSGGGKRVD
RAEQMRHEREKHYVPYQSSDHVSERQLALDKVDFARQAEGASVDIIMDDDRGMYNQKHGQ
RWDRRLKKYVGLSGNEPANKKIRTEDGTWLPASYKTGKYEEWKQKQKIGFNQKGAEGEGD
ADEQDYGRKRKWKMETSKGGPKHSELKNKDQILKGRRKQEKLENYMEHRRQSNIKKKASL
GGASSRGGGASRGGGASRGGGFRGGRGGGMGGARGGGASRGGGKFGKRR
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacgacgaggaagacttcaaacaattgcaaatttcgcagaatcgaaagcat
aaaaaagcgggaggatggcagcaattgggtctagatcactcaatcttcaaagctatcgaa
aagaagggattcaatcagccgacacccattcaacgaaaaacgattccatgcataatggac
ggaaaagatgtcgtcgccatgtcacgtaccggttcgggtaaaaccgccgccttcgtgatt
ccgatgcttcagaagttgaagggaagagatacgaagggaattcgggcgttgatggtatca
ccaacacgagaattggcacttcaaacattcaaagttgtcaaagagctcggccgcttcacc
ggactccgttgtgcgtgtctcgtcggaggagatgttcttgaggatcaattttcgacgatt
catgagaatcctgatattcttctcgccacaccgggacgtcttctccacgtcatcgtcgaa
atggatctccgtctttcattcgttaattatgttgtattcgatgaggctgatcgtctattc
gaaatgggttttcaggatcaattgactgaaacactgaaacgtatccctgaaagtcgtcaa
actcttcttttctccgccacactgccgaaaatgttggtcgatttcgcgaaagctggtctg
actgatccaatgttggtccgcctcgatgtagacgagaaagtgagtgagaaactgtcgatg
gtattctgtatgtgtcgtcccgaggagaaattgttcgctttgctccatttgtgcagacgt
atggaccgtgagaacaagcagacggtcgtattctgtgccacaatgaaacacgtcgagtac
gtcgtcggaattcttcatcgtgccggaatcgactgctcattcgtgtattctcagttggat
gcgaccgcccgtaaacagaatattcaaaagtttcacgagaaacagaataatattctcgtt
gtgacggacgtcgccgctcgtggagtcgatattccgctgttggatacggtgatcaacttg
catttcccatcaaaagccaaactattcgtgcatcgtgtcggtcgtgtcgcccgtgccggt
cgttctggaactgcaatctctctgattgcaaacgatgagttaccgtatctcacggattta
ttcatgtttttgggaaaacccatcaattttgcatcggacgcatcggaatacaaggaagac
gaaacactcatcggacgtgttcccgatagcattgtcagtttggaaacggaatttttcaat
tcaattcatgataataatgaggaaatgcttgatttacgtcaaaaagcgacgaatgcaatg
atgaaatacacgagaactcgtcaaccaccgtcagccgagtcggcgagacgtgtcaaacag
gatattcgaacggattcggtcgaatgtgctccacatccattcctgaaagcagaaggagac
aaacaaagtcacgatattctcaatcgactttcacagtataaaagtcgaaatacaatcttc
gaaatgaacaaatcgcaaaaatcgcaagctcttgccgtaatgcaagcgaaacgtaaagcc
catgaaccgcgtatttctacagtaaccgaagagaaacgaaaacaaaaagaggagagagag
cagagagacgcagagaaatcagtggaaggagagagagagcaaggagacgcagacattatc
ggagtggatgaaggagagctggaagctgtcttcggaacggtcatcggatcgacgaaacat
aatgagacgtcagaagagaagaagaaacagaagtcttctggaggaggaaagagagtcgat
agggctgagcagatgagacatgagagggaaaagcactacgttccatatcaatcatcggat
cacgtgtccgaaagacaattggctttggataaagttgatttcgcgagacaagccgaaggt
gcatctgtcgatatcattatggacgacgatagaggaatgtacaatcagaaacatggtcag
agatgggatcgtcgactgaaaaaatacgttggattaagtggaaatgagccggcgaataaa
aagattcgaacggaagacggtacatggcttccggcgagttataagactggaaaatatgaa
gaatggaaacagaaacagaagattggattcaatcagaagggagcagagggagaaggagac
gcagacgaacaggattacggtagaaagagaaagtggaaaatggagacgagcaagggagga
cccaaacactcggaactcaagaataaggaccagattcttaagggtcgccgtaaacaagag
aaactcgaaaactacatggagcatcgtcgtcaatcgaatatcaaaaagaaggcgtcgctg
ggcggagcctcgtcgagagggggcggagcctcaagagggggcggagcttcgagaggcggt
ggattcagaggagggcgtggcggaggaatgggcggagccagagggggcggagcttcccgc
ggaggcggaaaattcggaaaaagacgttga
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